Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcd3Q6P9Z1 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd3Q6P9Z1 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd3Q6P9Z1 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd3Q6P9Z1 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd3Q6P9Z1 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Smarcd3Q6P9Z1 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.42□□□□□ -0.26
Smarcd3Q6P9Z1 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd3Q6P9Z1 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd3Q6P9Z1 Gm11764-201ENSMUST00000120221 623 ntBASIC13.42□□□□□ -0.26
Smarcd3Q6P9Z1 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Smarcd3Q6P9Z1 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.42□□□□□ -0.26
Smarcd3Q6P9Z1 Gm27459-201ENSMUST00000184860 107 ntBASIC13.42□□□□□ -0.26
Smarcd3Q6P9Z1 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.42□□□□□ -0.26
Smarcd3Q6P9Z1 Gm34391-201ENSMUST00000203706 907 ntBASIC13.42□□□□□ -0.26
Smarcd3Q6P9Z1 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd3Q6P9Z1 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Smarcd3Q6P9Z1 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.42□□□□□ -0.26
Smarcd3Q6P9Z1 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd3Q6P9Z1 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.42□□□□□ -0.26
Smarcd3Q6P9Z1 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.42□□□□□ -0.26
Smarcd3Q6P9Z1 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Smarcd3Q6P9Z1 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Smarcd3Q6P9Z1 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd3Q6P9Z1 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd3Q6P9Z1 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd3Q6P9Z1 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd3Q6P9Z1 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd3Q6P9Z1 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Smarcd3Q6P9Z1 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd3Q6P9Z1 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd3Q6P9Z1 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd3Q6P9Z1 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.42□□□□□ -0.26
Smarcd3Q6P9Z1 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcd3Q6P9Z1 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd3Q6P9Z1 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd3Q6P9Z1 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd3Q6P9Z1 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd3Q6P9Z1 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Smarcd3Q6P9Z1 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd3Q6P9Z1 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd3Q6P9Z1 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd3Q6P9Z1 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd3Q6P9Z1 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd3Q6P9Z1 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd3Q6P9Z1 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd3Q6P9Z1 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd3Q6P9Z1 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd3Q6P9Z1 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd3Q6P9Z1 Gm7153-201ENSMUST00000117092 455 ntBASIC13.41□□□□□ -0.26
Smarcd3Q6P9Z1 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.41□□□□□ -0.26
Smarcd3Q6P9Z1 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.41□□□□□ -0.26
Smarcd3Q6P9Z1 Gm6376-201ENSMUST00000209407 580 ntBASIC13.41□□□□□ -0.26
Smarcd3Q6P9Z1 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.41□□□□□ -0.26
Smarcd3Q6P9Z1 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC13.41□□□□□ -0.26
Smarcd3Q6P9Z1 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd3Q6P9Z1 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.41□□□□□ -0.26
Smarcd3Q6P9Z1 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Smarcd3Q6P9Z1 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Smarcd3Q6P9Z1 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd3Q6P9Z1 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd3Q6P9Z1 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd3Q6P9Z1 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd3Q6P9Z1 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcd3Q6P9Z1 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcd3Q6P9Z1 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.4□□□□□ -0.26
Smarcd3Q6P9Z1 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcd3Q6P9Z1 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcd3Q6P9Z1 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcd3Q6P9Z1 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcd3Q6P9Z1 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcd3Q6P9Z1 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcd3Q6P9Z1 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcd3Q6P9Z1 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Smarcd3Q6P9Z1 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Smarcd3Q6P9Z1 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcd3Q6P9Z1 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcd3Q6P9Z1 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.4□□□□□ -0.26
Smarcd3Q6P9Z1 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcd3Q6P9Z1 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC13.4□□□□□ -0.26
Smarcd3Q6P9Z1 Gm27741-201ENSMUST00000185060 237 ntBASIC13.4□□□□□ -0.26
Smarcd3Q6P9Z1 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Smarcd3Q6P9Z1 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcd3Q6P9Z1 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.4□□□□□ -0.26
Smarcd3Q6P9Z1 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcd3Q6P9Z1 Rps4l-201ENSMUST00000071745 943 ntBASIC13.4□□□□□ -0.26
Smarcd3Q6P9Z1 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcd3Q6P9Z1 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcd3Q6P9Z1 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcd3Q6P9Z1 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcd3Q6P9Z1 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Smarcd3Q6P9Z1 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcd3Q6P9Z1 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.4□□□□□ -0.26
Smarcd3Q6P9Z1 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcd3Q6P9Z1 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcd3Q6P9Z1 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcd3Q6P9Z1 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcd3Q6P9Z1 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Smarcd3Q6P9Z1 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcd3Q6P9Z1 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms