Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Six3Q62233 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Six3Q62233 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Six3Q62233 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Six3Q62233 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Six3Q62233 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.29□□□□□ -0.12
Six3Q62233 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Six3Q62233 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.29□□□□□ -0.12
Six3Q62233 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Six3Q62233 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Six3Q62233 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Six3Q62233 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Six3Q62233 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.29□□□□□ -0.12
Six3Q62233 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Six3Q62233 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Six3Q62233 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.28□□□□□ -0.12
Six3Q62233 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Six3Q62233 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Six3Q62233 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Six3Q62233 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Six3Q62233 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Six3Q62233 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Six3Q62233 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Six3Q62233 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Six3Q62233 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Six3Q62233 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.28□□□□□ -0.12
Six3Q62233 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Six3Q62233 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.28□□□□□ -0.12
Six3Q62233 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.28□□□□□ -0.12
Six3Q62233 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Six3Q62233 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Six3Q62233 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Six3Q62233 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Six3Q62233 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Six3Q62233 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Six3Q62233 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Six3Q62233 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Six3Q62233 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Six3Q62233 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Six3Q62233 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Six3Q62233 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.27□□□□□ -0.12
Six3Q62233 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Six3Q62233 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Six3Q62233 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Six3Q62233 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Six3Q62233 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Six3Q62233 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.27□□□□□ -0.12
Six3Q62233 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Six3Q62233 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Six3Q62233 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Six3Q62233 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Six3Q62233 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Six3Q62233 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Six3Q62233 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Six3Q62233 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.27□□□□□ -0.12
Six3Q62233 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.27□□□□□ -0.12
Six3Q62233 Gm16198-201ENSMUST00000118766 670 ntBASIC14.27□□□□□ -0.13
Six3Q62233 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.27□□□□□ -0.13
Six3Q62233 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Six3Q62233 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.27□□□□□ -0.13
Six3Q62233 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Six3Q62233 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.27□□□□□ -0.13
Six3Q62233 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.27□□□□□ -0.13
Six3Q62233 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Six3Q62233 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.27□□□□□ -0.13
Six3Q62233 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Six3Q62233 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Six3Q62233 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Six3Q62233 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Six3Q62233 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Six3Q62233 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.27□□□□□ -0.13
Six3Q62233 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Six3Q62233 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.27□□□□□ -0.13
Six3Q62233 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.27□□□□□ -0.13
Six3Q62233 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Six3Q62233 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Six3Q62233 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Six3Q62233 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Six3Q62233 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Six3Q62233 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.26□□□□□ -0.13
Six3Q62233 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Six3Q62233 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Six3Q62233 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Six3Q62233 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.26□□□□□ -0.13
Six3Q62233 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Six3Q62233 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.26□□□□□ -0.13
Six3Q62233 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Six3Q62233 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Six3Q62233 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.26□□□□□ -0.13
Six3Q62233 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Six3Q62233 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Six3Q62233 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Six3Q62233 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Six3Q62233 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Six3Q62233 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.26□□□□□ -0.13
Six3Q62233 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Six3Q62233 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.26□□□□□ -0.13
Six3Q62233 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Six3Q62233 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.26□□□□□ -0.13
Six3Q62233 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms