Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Traf4Q61382 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Traf4Q61382 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Traf4Q61382 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Traf4Q61382 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Traf4Q61382 Matn2-206ENSMUST00000228570 2798 ntBASIC13.02□□□□□ -0.33
Traf4Q61382 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Traf4Q61382 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Traf4Q61382 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Traf4Q61382 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Traf4Q61382 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Traf4Q61382 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.01□□□□□ -0.33
Traf4Q61382 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Traf4Q61382 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Traf4Q61382 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Traf4Q61382 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Traf4Q61382 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Traf4Q61382 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.01□□□□□ -0.33
Traf4Q61382 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Traf4Q61382 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.01□□□□□ -0.33
Traf4Q61382 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Traf4Q61382 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Traf4Q61382 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Traf4Q61382 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Traf4Q61382 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Traf4Q61382 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Traf4Q61382 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Traf4Q61382 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Traf4Q61382 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Traf4Q61382 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.01□□□□□ -0.33
Traf4Q61382 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Traf4Q61382 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Traf4Q61382 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Traf4Q61382 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Traf4Q61382 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Traf4Q61382 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Traf4Q61382 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Traf4Q61382 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Traf4Q61382 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Traf4Q61382 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Traf4Q61382 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13□□□□□ -0.33
Traf4Q61382 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Traf4Q61382 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Traf4Q61382 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13□□□□□ -0.33
Traf4Q61382 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13□□□□□ -0.33
Traf4Q61382 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Traf4Q61382 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13□□□□□ -0.33
Traf4Q61382 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13□□□□□ -0.33
Traf4Q61382 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13□□□□□ -0.33
Traf4Q61382 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13□□□□□ -0.33
Traf4Q61382 Gm5177-201ENSMUST00000183092 997 ntBASIC13□□□□□ -0.33
Traf4Q61382 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13□□□□□ -0.33
Traf4Q61382 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13□□□□□ -0.33
Traf4Q61382 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13□□□□□ -0.33
Traf4Q61382 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Traf4Q61382 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Traf4Q61382 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Traf4Q61382 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Traf4Q61382 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Traf4Q61382 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Traf4Q61382 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Traf4Q61382 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13□□□□□ -0.33
Traf4Q61382 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13□□□□□ -0.33
Traf4Q61382 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Traf4Q61382 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Traf4Q61382 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Traf4Q61382 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Traf4Q61382 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Traf4Q61382 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.99□□□□□ -0.33
Traf4Q61382 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.99□□□□□ -0.33
Traf4Q61382 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Traf4Q61382 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Traf4Q61382 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Traf4Q61382 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Traf4Q61382 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Traf4Q61382 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Traf4Q61382 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.99□□□□□ -0.33
Traf4Q61382 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Traf4Q61382 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Traf4Q61382 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Traf4Q61382 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Traf4Q61382 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Traf4Q61382 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.99□□□□□ -0.33
Traf4Q61382 Mir1895-201ENSMUST00000122615 79 ntBASIC12.99□□□□□ -0.33
Traf4Q61382 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.99□□□□□ -0.33
Traf4Q61382 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Traf4Q61382 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Traf4Q61382 Gm27301-201ENSMUST00000184012 127 ntBASIC12.99□□□□□ -0.33
Traf4Q61382 Gm27494-201ENSMUST00000184735 189 ntBASIC12.99□□□□□ -0.33
Traf4Q61382 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.99□□□□□ -0.33
Traf4Q61382 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Traf4Q61382 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Traf4Q61382 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Traf4Q61382 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Traf4Q61382 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Traf4Q61382 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Traf4Q61382 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Traf4Q61382 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Traf4Q61382 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Traf4Q61382 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms