Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shroom1Q5SX79 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.54■□□□□ 0.08
Shroom1Q5SX79 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Shroom1Q5SX79 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.54■□□□□ 0.08
Shroom1Q5SX79 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shroom1Q5SX79 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shroom1Q5SX79 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shroom1Q5SX79 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shroom1Q5SX79 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Shroom1Q5SX79 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Shroom1Q5SX79 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.54■□□□□ 0.08
Shroom1Q5SX79 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shroom1Q5SX79 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shroom1Q5SX79 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shroom1Q5SX79 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.53■□□□□ 0.08
Shroom1Q5SX79 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shroom1Q5SX79 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.53■□□□□ 0.08
Shroom1Q5SX79 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shroom1Q5SX79 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shroom1Q5SX79 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Shroom1Q5SX79 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shroom1Q5SX79 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shroom1Q5SX79 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shroom1Q5SX79 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shroom1Q5SX79 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC15.53■□□□□ 0.08
Shroom1Q5SX79 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Shroom1Q5SX79 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Shroom1Q5SX79 Gm17837-201ENSMUST00000186435 985 ntBASIC15.53■□□□□ 0.08
Shroom1Q5SX79 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Shroom1Q5SX79 AC125206.2-201ENSMUST00000217454 574 ntBASIC15.53■□□□□ 0.08
Shroom1Q5SX79 Gm5626-201ENSMUST00000222151 1058 ntBASIC15.53■□□□□ 0.08
Shroom1Q5SX79 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Shroom1Q5SX79 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shroom1Q5SX79 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shroom1Q5SX79 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shroom1Q5SX79 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shroom1Q5SX79 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shroom1Q5SX79 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shroom1Q5SX79 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shroom1Q5SX79 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.53■□□□□ 0.08
Shroom1Q5SX79 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Shroom1Q5SX79 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shroom1Q5SX79 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Shroom1Q5SX79 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Shroom1Q5SX79 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Shroom1Q5SX79 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Shroom1Q5SX79 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Shroom1Q5SX79 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.52■□□□□ 0.08
Shroom1Q5SX79 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Shroom1Q5SX79 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Shroom1Q5SX79 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Shroom1Q5SX79 Gm12151-201ENSMUST00000121374 290 ntBASIC15.52■□□□□ 0.08
Shroom1Q5SX79 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.52■□□□□ 0.08
Shroom1Q5SX79 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.52■□□□□ 0.08
Shroom1Q5SX79 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC15.52■□□□□ 0.08
Shroom1Q5SX79 Gm6888-201ENSMUST00000221983 706 ntBASIC15.52■□□□□ 0.08
Shroom1Q5SX79 CT025535.1-201ENSMUST00000227172 491 ntBASIC15.52■□□□□ 0.08
Shroom1Q5SX79 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Shroom1Q5SX79 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Shroom1Q5SX79 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Shroom1Q5SX79 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Shroom1Q5SX79 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Shroom1Q5SX79 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Shroom1Q5SX79 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Shroom1Q5SX79 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Shroom1Q5SX79 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Shroom1Q5SX79 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Shroom1Q5SX79 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.51■□□□□ 0.07
Shroom1Q5SX79 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Shroom1Q5SX79 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Shroom1Q5SX79 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Shroom1Q5SX79 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Shroom1Q5SX79 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Shroom1Q5SX79 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Shroom1Q5SX79 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Shroom1Q5SX79 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Shroom1Q5SX79 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Shroom1Q5SX79 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Shroom1Q5SX79 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Shroom1Q5SX79 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Shroom1Q5SX79 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Shroom1Q5SX79 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC15.51■□□□□ 0.07
Shroom1Q5SX79 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.51■□□□□ 0.07
Shroom1Q5SX79 Gm14767-201ENSMUST00000121559 586 ntBASIC15.51■□□□□ 0.07
Shroom1Q5SX79 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Shroom1Q5SX79 Gm27680-201ENSMUST00000184192 160 ntBASIC15.51■□□□□ 0.07
Shroom1Q5SX79 Gm38294-201ENSMUST00000192831 381 ntBASIC15.51■□□□□ 0.07
Shroom1Q5SX79 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC15.51■□□□□ 0.07
Shroom1Q5SX79 Arhgef33-209ENSMUST00000225223 714 ntBASIC15.51■□□□□ 0.07
Shroom1Q5SX79 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Shroom1Q5SX79 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Shroom1Q5SX79 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Shroom1Q5SX79 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Shroom1Q5SX79 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Shroom1Q5SX79 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.51■□□□□ 0.07
Shroom1Q5SX79 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Shroom1Q5SX79 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Shroom1Q5SX79 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Shroom1Q5SX79 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Shroom1Q5SX79 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms