Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
Trav6d-4Q5R1I0 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6d-4Q5R1I0 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6d-4Q5R1I0 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Trav6d-4Q5R1I0 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6d-4Q5R1I0 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.27□□□□□ -0.45
Trav6d-4Q5R1I0 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-4Q5R1I0 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trav6d-4Q5R1I0 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-4Q5R1I0 Gm15693-201ENSMUST00000120470 637 ntBASIC12.27□□□□□ -0.45
Trav6d-4Q5R1I0 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Trav6d-4Q5R1I0 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-4Q5R1I0 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-4Q5R1I0 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-4Q5R1I0 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trav6d-4Q5R1I0 Gm10576-201ENSMUST00000191927 825 ntBASIC12.27□□□□□ -0.45
Trav6d-4Q5R1I0 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-4Q5R1I0 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.27□□□□□ -0.45
Trav6d-4Q5R1I0 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-4Q5R1I0 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-4Q5R1I0 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Trav6d-4Q5R1I0 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.27□□□□□ -0.45
Trav6d-4Q5R1I0 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-4Q5R1I0 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-4Q5R1I0 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-4Q5R1I0 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.27□□□□□ -0.45
Trav6d-4Q5R1I0 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-4Q5R1I0 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-4Q5R1I0 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-4Q5R1I0 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-4Q5R1I0 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-4Q5R1I0 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-4Q5R1I0 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-4Q5R1I0 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-4Q5R1I0 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-4Q5R1I0 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-4Q5R1I0 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav6d-4Q5R1I0 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-4Q5R1I0 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-4Q5R1I0 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav6d-4Q5R1I0 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Trav6d-4Q5R1I0 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav6d-4Q5R1I0 Gm8410-201ENSMUST00000117225 605 ntBASIC12.26□□□□□ -0.45
Trav6d-4Q5R1I0 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.26□□□□□ -0.45
Trav6d-4Q5R1I0 Gm29541-201ENSMUST00000191351 678 ntBASIC12.26□□□□□ -0.45
Trav6d-4Q5R1I0 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-4Q5R1I0 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-4Q5R1I0 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav6d-4Q5R1I0 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav6d-4Q5R1I0 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav6d-4Q5R1I0 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-4Q5R1I0 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav6d-4Q5R1I0 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav6d-4Q5R1I0 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-4Q5R1I0 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-4Q5R1I0 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-4Q5R1I0 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-4Q5R1I0 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Trav6d-4Q5R1I0 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-4Q5R1I0 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-4Q5R1I0 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav6d-4Q5R1I0 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-4Q5R1I0 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-4Q5R1I0 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-4Q5R1I0 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-4Q5R1I0 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-4Q5R1I0 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-4Q5R1I0 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-4Q5R1I0 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.25□□□□□ -0.45
Trav6d-4Q5R1I0 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trav6d-4Q5R1I0 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav6d-4Q5R1I0 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.25□□□□□ -0.45
Trav6d-4Q5R1I0 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav6d-4Q5R1I0 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.25□□□□□ -0.45
Trav6d-4Q5R1I0 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-4Q5R1I0 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-4Q5R1I0 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-4Q5R1I0 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-4Q5R1I0 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-4Q5R1I0 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-4Q5R1I0 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-4Q5R1I0 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav6d-4Q5R1I0 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav6d-4Q5R1I0 Auts2-212ENSMUST00000178555 309 ntBASIC12.25□□□□□ -0.45
Trav6d-4Q5R1I0 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trav6d-4Q5R1I0 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav6d-4Q5R1I0 Gm18766-201ENSMUST00000189811 808 ntBASIC12.25□□□□□ -0.45
Trav6d-4Q5R1I0 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-4Q5R1I0 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trav6d-4Q5R1I0 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Trav6d-4Q5R1I0 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-4Q5R1I0 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-4Q5R1I0 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-4Q5R1I0 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav6d-4Q5R1I0 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-4Q5R1I0 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav6d-4Q5R1I0 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav6d-4Q5R1I0 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-4Q5R1I0 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-4Q5R1I0 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms