Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8d-2Q5R1B6 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8d-2Q5R1B6 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Trav8d-2Q5R1B6 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8d-2Q5R1B6 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8d-2Q5R1B6 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8d-2Q5R1B6 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8d-2Q5R1B6 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trav8d-2Q5R1B6 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8d-2Q5R1B6 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8d-2Q5R1B6 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.12□□□□□ -0.15
Trav8d-2Q5R1B6 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8d-2Q5R1B6 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8d-2Q5R1B6 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8d-2Q5R1B6 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.12□□□□□ -0.15
Trav8d-2Q5R1B6 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.12□□□□□ -0.15
Trav8d-2Q5R1B6 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.12□□□□□ -0.15
Trav8d-2Q5R1B6 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC14.12□□□□□ -0.15
Trav8d-2Q5R1B6 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8d-2Q5R1B6 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8d-2Q5R1B6 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.12□□□□□ -0.15
Trav8d-2Q5R1B6 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8d-2Q5R1B6 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8d-2Q5R1B6 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trav8d-2Q5R1B6 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8d-2Q5R1B6 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8d-2Q5R1B6 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8d-2Q5R1B6 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8d-2Q5R1B6 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8d-2Q5R1B6 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Trav8d-2Q5R1B6 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8d-2Q5R1B6 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trav8d-2Q5R1B6 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8d-2Q5R1B6 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8d-2Q5R1B6 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8d-2Q5R1B6 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8d-2Q5R1B6 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8d-2Q5R1B6 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8d-2Q5R1B6 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8d-2Q5R1B6 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.11□□□□□ -0.15
Trav8d-2Q5R1B6 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8d-2Q5R1B6 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8d-2Q5R1B6 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8d-2Q5R1B6 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8d-2Q5R1B6 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav8d-2Q5R1B6 Gm13226-201ENSMUST00000117838 404 ntBASIC14.11□□□□□ -0.15
Trav8d-2Q5R1B6 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8d-2Q5R1B6 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Trav8d-2Q5R1B6 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8d-2Q5R1B6 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8d-2Q5R1B6 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav8d-2Q5R1B6 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8d-2Q5R1B6 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.11□□□□□ -0.15
Trav8d-2Q5R1B6 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8d-2Q5R1B6 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8d-2Q5R1B6 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav8d-2Q5R1B6 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8d-2Q5R1B6 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8d-2Q5R1B6 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trav8d-2Q5R1B6 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Trav8d-2Q5R1B6 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav8d-2Q5R1B6 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trav8d-2Q5R1B6 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
Trav8d-2Q5R1B6 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-2Q5R1B6 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-2Q5R1B6 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trav8d-2Q5R1B6 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-2Q5R1B6 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-2Q5R1B6 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-2Q5R1B6 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-2Q5R1B6 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trav8d-2Q5R1B6 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-2Q5R1B6 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-2Q5R1B6 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-2Q5R1B6 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-2Q5R1B6 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-2Q5R1B6 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-2Q5R1B6 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-2Q5R1B6 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-2Q5R1B6 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-2Q5R1B6 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav8d-2Q5R1B6 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.1□□□□□ -0.15
Trav8d-2Q5R1B6 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-2Q5R1B6 Snora78-201ENSMUST00000158630 128 ntBASIC14.1□□□□□ -0.15
Trav8d-2Q5R1B6 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-2Q5R1B6 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trav8d-2Q5R1B6 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.1□□□□□ -0.15
Trav8d-2Q5R1B6 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.1□□□□□ -0.15
Trav8d-2Q5R1B6 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.1□□□□□ -0.15
Trav8d-2Q5R1B6 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.1□□□□□ -0.15
Trav8d-2Q5R1B6 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trav8d-2Q5R1B6 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-2Q5R1B6 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-2Q5R1B6 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-2Q5R1B6 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-2Q5R1B6 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.1□□□□□ -0.15
Trav8d-2Q5R1B6 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-2Q5R1B6 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-2Q5R1B6 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-2Q5R1B6 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms