Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1brtQ3UNC9 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks1brtQ3UNC9 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks1brtQ3UNC9 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC10.5□□□□□ -0.73
Cks1brtQ3UNC9 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks1brtQ3UNC9 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks1brtQ3UNC9 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC10.5□□□□□ -0.73
Cks1brtQ3UNC9 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks1brtQ3UNC9 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks1brtQ3UNC9 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks1brtQ3UNC9 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Cks1brtQ3UNC9 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Cks1brtQ3UNC9 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks1brtQ3UNC9 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks1brtQ3UNC9 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks1brtQ3UNC9 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks1brtQ3UNC9 Gm13181-201ENSMUST00000120117 1069 ntBASIC10.5□□□□□ -0.73
Cks1brtQ3UNC9 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC10.5□□□□□ -0.73
Cks1brtQ3UNC9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC10.5□□□□□ -0.73
Cks1brtQ3UNC9 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks1brtQ3UNC9 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks1brtQ3UNC9 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cks1brtQ3UNC9 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks1brtQ3UNC9 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks1brtQ3UNC9 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cks1brtQ3UNC9 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Cks1brtQ3UNC9 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks1brtQ3UNC9 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks1brtQ3UNC9 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks1brtQ3UNC9 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks1brtQ3UNC9 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC10.5□□□□□ -0.73
Cks1brtQ3UNC9 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks1brtQ3UNC9 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks1brtQ3UNC9 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks1brtQ3UNC9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Cks1brtQ3UNC9 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks1brtQ3UNC9 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cks1brtQ3UNC9 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Mir6404-201ENSMUST00000183699 94 ntBASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms