Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC12.05□□□□□ -0.48
Trim63Q38HM4 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim63Q38HM4 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim63Q38HM4 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Trim63Q38HM4 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trim63Q38HM4 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC12.05□□□□□ -0.48
Trim63Q38HM4 Ap3s1-204ENSMUST00000225520 957 ntBASIC12.05□□□□□ -0.48
Trim63Q38HM4 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim63Q38HM4 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.05□□□□□ -0.48
Trim63Q38HM4 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim63Q38HM4 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim63Q38HM4 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trim63Q38HM4 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim63Q38HM4 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim63Q38HM4 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim63Q38HM4 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim63Q38HM4 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trim63Q38HM4 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trim63Q38HM4 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trim63Q38HM4 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim63Q38HM4 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim63Q38HM4 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim63Q38HM4 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.05□□□□□ -0.48
Trim63Q38HM4 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim63Q38HM4 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim63Q38HM4 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim63Q38HM4 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim63Q38HM4 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim63Q38HM4 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim63Q38HM4 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim63Q38HM4 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim63Q38HM4 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim63Q38HM4 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim63Q38HM4 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim63Q38HM4 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trim63Q38HM4 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim63Q38HM4 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim63Q38HM4 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim63Q38HM4 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim63Q38HM4 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.04□□□□□ -0.48
Trim63Q38HM4 Gm7291-201ENSMUST00000199147 382 ntBASIC12.04□□□□□ -0.48
Trim63Q38HM4 Gm9731-201ENSMUST00000209480 747 ntBASIC12.04□□□□□ -0.48
Trim63Q38HM4 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim63Q38HM4 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim63Q38HM4 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim63Q38HM4 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim63Q38HM4 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim63Q38HM4 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim63Q38HM4 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim63Q38HM4 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim63Q38HM4 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.04□□□□□ -0.48
Trim63Q38HM4 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trim63Q38HM4 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim63Q38HM4 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim63Q38HM4 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim63Q38HM4 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim63Q38HM4 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim63Q38HM4 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim63Q38HM4 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim63Q38HM4 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim63Q38HM4 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC12.03□□□□□ -0.48
Trim63Q38HM4 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trim63Q38HM4 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim63Q38HM4 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim63Q38HM4 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim63Q38HM4 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim63Q38HM4 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim63Q38HM4 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim63Q38HM4 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim63Q38HM4 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim63Q38HM4 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trim63Q38HM4 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Trim63Q38HM4 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC12.03□□□□□ -0.48
Trim63Q38HM4 Gm21168-201ENSMUST00000199646 1096 ntBASIC12.03□□□□□ -0.48
Trim63Q38HM4 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim63Q38HM4 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim63Q38HM4 Zfp264-201ENSMUST00000208656 1563 ntBASIC12.03□□□□□ -0.48
Trim63Q38HM4 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim63Q38HM4 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim63Q38HM4 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim63Q38HM4 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trim63Q38HM4 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim63Q38HM4 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim63Q38HM4 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim63Q38HM4 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trim63Q38HM4 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Trim63Q38HM4 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim63Q38HM4 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim63Q38HM4 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim63Q38HM4 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Trim63Q38HM4 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim63Q38HM4 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim63Q38HM4 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim63Q38HM4 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim63Q38HM4 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim63Q38HM4 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trim63Q38HM4 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Trim63Q38HM4 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.02□□□□□ -0.48
Trim63Q38HM4 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trim63Q38HM4 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms