Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ebf1Q07802 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.81□□□□□ -0.04
Ebf1Q07802 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ebf1Q07802 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ebf1Q07802 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.8□□□□□ -0.04
Ebf1Q07802 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ebf1Q07802 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ebf1Q07802 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ebf1Q07802 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ebf1Q07802 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ebf1Q07802 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ebf1Q07802 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.8□□□□□ -0.04
Ebf1Q07802 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ebf1Q07802 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ebf1Q07802 Gm14719-201ENSMUST00000121891 340 ntBASIC14.8□□□□□ -0.04
Ebf1Q07802 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.8□□□□□ -0.04
Ebf1Q07802 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Ebf1Q07802 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Ebf1Q07802 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Ebf1Q07802 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.8□□□□□ -0.04
Ebf1Q07802 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.8□□□□□ -0.04
Ebf1Q07802 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.8□□□□□ -0.04
Ebf1Q07802 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.8□□□□□ -0.04
Ebf1Q07802 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ebf1Q07802 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ebf1Q07802 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Ebf1Q07802 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ebf1Q07802 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ebf1Q07802 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ebf1Q07802 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ebf1Q07802 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ebf1Q07802 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ebf1Q07802 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Ebf1Q07802 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ebf1Q07802 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf1Q07802 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.79□□□□□ -0.04
Ebf1Q07802 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf1Q07802 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf1Q07802 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf1Q07802 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf1Q07802 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.79□□□□□ -0.04
Ebf1Q07802 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf1Q07802 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf1Q07802 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf1Q07802 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.79□□□□□ -0.04
Ebf1Q07802 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf1Q07802 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf1Q07802 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ebf1Q07802 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf1Q07802 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Ebf1Q07802 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf1Q07802 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf1Q07802 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf1Q07802 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf1Q07802 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf1Q07802 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf1Q07802 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ebf1Q07802 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf1Q07802 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf1Q07802 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf1Q07802 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf1Q07802 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.78□□□□□ -0.04
Ebf1Q07802 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf1Q07802 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf1Q07802 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf1Q07802 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf1Q07802 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ebf1Q07802 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf1Q07802 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Ebf1Q07802 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf1Q07802 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.78□□□□□ -0.04
Ebf1Q07802 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ebf1Q07802 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Ebf1Q07802 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ebf1Q07802 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf1Q07802 Gm27838-201ENSMUST00000184829 128 ntBASIC14.78□□□□□ -0.04
Ebf1Q07802 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf1Q07802 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.78□□□□□ -0.04
Ebf1Q07802 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf1Q07802 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf1Q07802 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Ebf1Q07802 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.78□□□□□ -0.04
Ebf1Q07802 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf1Q07802 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf1Q07802 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf1Q07802 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf1Q07802 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf1Q07802 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.78□□□□□ -0.04
Ebf1Q07802 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.78□□□□□ -0.04
Ebf1Q07802 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Ebf1Q07802 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Ebf1Q07802 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf1Q07802 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf1Q07802 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf1Q07802 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.78□□□□□ -0.04
Ebf1Q07802 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.78□□□□□ -0.04
Ebf1Q07802 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ebf1Q07802 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ebf1Q07802 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ebf1Q07802 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms