Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scn1bP97952 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scn1bP97952 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC13.37□□□□□ -0.27
Scn1bP97952 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Scn1bP97952 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Scn1bP97952 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
Scn1bP97952 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn1bP97952 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn1bP97952 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scn1bP97952 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn1bP97952 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Scn1bP97952 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scn1bP97952 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.37□□□□□ -0.27
Scn1bP97952 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn1bP97952 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scn1bP97952 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Scn1bP97952 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn1bP97952 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.37□□□□□ -0.27
Scn1bP97952 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn1bP97952 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn1bP97952 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scn1bP97952 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn1bP97952 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.36□□□□□ -0.27
Scn1bP97952 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn1bP97952 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scn1bP97952 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
Scn1bP97952 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scn1bP97952 AA414768-201ENSMUST00000121924 1257 ntBASIC13.36□□□□□ -0.27
Scn1bP97952 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Scn1bP97952 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.36□□□□□ -0.27
Scn1bP97952 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn1bP97952 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn1bP97952 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn1bP97952 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Scn1bP97952 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn1bP97952 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.36□□□□□ -0.27
Scn1bP97952 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn1bP97952 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn1bP97952 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Scn1bP97952 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn1bP97952 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scn1bP97952 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn1bP97952 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Scn1bP97952 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn1bP97952 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn1bP97952 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn1bP97952 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1bP97952 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1bP97952 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1bP97952 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1bP97952 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1bP97952 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1bP97952 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1bP97952 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1bP97952 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1bP97952 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1bP97952 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Scn1bP97952 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1bP97952 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1bP97952 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1bP97952 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1bP97952 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1bP97952 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1bP97952 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1bP97952 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1bP97952 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1bP97952 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1bP97952 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Scn1bP97952 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1bP97952 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.35□□□□□ -0.27
Scn1bP97952 Gm29518-201ENSMUST00000190858 372 ntBASIC13.35□□□□□ -0.27
Scn1bP97952 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1bP97952 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1bP97952 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1bP97952 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1bP97952 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1bP97952 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1bP97952 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.35□□□□□ -0.27
Scn1bP97952 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Scn1bP97952 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1bP97952 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1bP97952 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1bP97952 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1bP97952 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1bP97952 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1bP97952 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1bP97952 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1bP97952 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn1bP97952 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1bP97952 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.34□□□□□ -0.27
Scn1bP97952 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1bP97952 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1bP97952 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1bP97952 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1bP97952 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1bP97952 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1bP97952 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.34□□□□□ -0.27
Scn1bP97952 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Scn1bP97952 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1bP97952 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms