Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd3P97770 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd3P97770 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd3P97770 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd3P97770 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd3P97770 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.89□□□□□ -0.03
Thumpd3P97770 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd3P97770 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd3P97770 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.89□□□□□ -0.03
Thumpd3P97770 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Thumpd3P97770 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Thumpd3P97770 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.89□□□□□ -0.03
Thumpd3P97770 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.89□□□□□ -0.03
Thumpd3P97770 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd3P97770 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd3P97770 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd3P97770 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.89□□□□□ -0.03
Thumpd3P97770 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd3P97770 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd3P97770 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd3P97770 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd3P97770 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd3P97770 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd3P97770 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd3P97770 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd3P97770 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd3P97770 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd3P97770 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd3P97770 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd3P97770 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd3P97770 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd3P97770 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Thumpd3P97770 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd3P97770 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
Thumpd3P97770 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Thumpd3P97770 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Thumpd3P97770 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Thumpd3P97770 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Thumpd3P97770 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Thumpd3P97770 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Thumpd3P97770 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Thumpd3P97770 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Thumpd3P97770 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.88□□□□□ -0.03
Thumpd3P97770 Gm9727-201ENSMUST00000161387 555 ntBASIC14.88□□□□□ -0.03
Thumpd3P97770 Gm10499-201ENSMUST00000174094 934 ntBASIC14.88□□□□□ -0.03
Thumpd3P97770 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.88□□□□□ -0.03
Thumpd3P97770 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.88□□□□□ -0.03
Thumpd3P97770 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Thumpd3P97770 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Thumpd3P97770 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Thumpd3P97770 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Thumpd3P97770 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Thumpd3P97770 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Thumpd3P97770 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Thumpd3P97770 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Thumpd3P97770 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Thumpd3P97770 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Thumpd3P97770 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.88□□□□□ -0.03
Thumpd3P97770 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Thumpd3P97770 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.88□□□□□ -0.03
Thumpd3P97770 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.88□□□□□ -0.03
Thumpd3P97770 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Thumpd3P97770 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Thumpd3P97770 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.87□□□□□ -0.03
Thumpd3P97770 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Thumpd3P97770 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Thumpd3P97770 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thumpd3P97770 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thumpd3P97770 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Thumpd3P97770 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thumpd3P97770 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thumpd3P97770 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.87□□□□□ -0.03
Thumpd3P97770 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thumpd3P97770 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thumpd3P97770 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thumpd3P97770 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thumpd3P97770 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thumpd3P97770 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.87□□□□□ -0.03
Thumpd3P97770 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Thumpd3P97770 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Thumpd3P97770 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thumpd3P97770 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thumpd3P97770 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Thumpd3P97770 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Thumpd3P97770 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thumpd3P97770 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Thumpd3P97770 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Thumpd3P97770 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thumpd3P97770 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thumpd3P97770 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thumpd3P97770 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Thumpd3P97770 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Thumpd3P97770 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Thumpd3P97770 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Thumpd3P97770 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Thumpd3P97770 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Thumpd3P97770 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.86□□□□□ -0.03
Thumpd3P97770 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Thumpd3P97770 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.86□□□□□ -0.03
Thumpd3P97770 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms