Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trim43bP86448 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trim43bP86448 Gm11779-201ENSMUST00000118541 368 ntBASIC15.04■□□□□ -0
Trim43bP86448 Gm5682-201ENSMUST00000173402 505 ntBASIC15.04■□□□□ -0
Trim43bP86448 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.04■□□□□ -0
Trim43bP86448 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim43bP86448 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim43bP86448 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim43bP86448 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim43bP86448 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Trim43bP86448 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trim43bP86448 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trim43bP86448 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43bP86448 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43bP86448 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC15.03■□□□□ -0
Trim43bP86448 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43bP86448 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43bP86448 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.03■□□□□ -0
Trim43bP86448 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43bP86448 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43bP86448 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43bP86448 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.03■□□□□ -0
Trim43bP86448 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.03■□□□□ -0
Trim43bP86448 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43bP86448 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.03■□□□□ -0
Trim43bP86448 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43bP86448 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43bP86448 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43bP86448 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43bP86448 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43bP86448 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43bP86448 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trim43bP86448 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Trim43bP86448 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trim43bP86448 Mir8117-201ENSMUST00000184773 107 ntBASIC15.03■□□□□ -0
Trim43bP86448 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43bP86448 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43bP86448 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43bP86448 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43bP86448 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43bP86448 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43bP86448 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim43bP86448 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43bP86448 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Trim43bP86448 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.03■□□□□ -0
Trim43bP86448 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43bP86448 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43bP86448 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43bP86448 Gm28182-201ENSMUST00000188354 2477 ntBASIC15.03■□□□□ -0
Trim43bP86448 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43bP86448 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Trim43bP86448 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trim43bP86448 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim43bP86448 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Trim43bP86448 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trim43bP86448 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Trim43bP86448 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.02■□□□□ -0
Trim43bP86448 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim43bP86448 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trim43bP86448 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim43bP86448 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim43bP86448 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.02■□□□□ -0
Trim43bP86448 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim43bP86448 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.02■□□□□ -0
Trim43bP86448 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.02■□□□□ -0
Trim43bP86448 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim43bP86448 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Trim43bP86448 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim43bP86448 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim43bP86448 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Trim43bP86448 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim43bP86448 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
Trim43bP86448 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim43bP86448 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.02□□□□□ -0.01
Trim43bP86448 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim43bP86448 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.02□□□□□ -0.01
Trim43bP86448 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.02□□□□□ -0.01
Trim43bP86448 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim43bP86448 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim43bP86448 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim43bP86448 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Trim43bP86448 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim43bP86448 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43bP86448 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trim43bP86448 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43bP86448 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43bP86448 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.01□□□□□ -0.01
Trim43bP86448 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Trim43bP86448 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43bP86448 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43bP86448 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43bP86448 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43bP86448 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43bP86448 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.01□□□□□ -0.01
Trim43bP86448 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Trim43bP86448 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trim43bP86448 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43bP86448 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.01□□□□□ -0.01
Trim43bP86448 Gm2756-201ENSMUST00000195851 400 ntBASIC15.01□□□□□ -0.01
Trim43bP86448 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms