Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CiitaP79621 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CiitaP79621 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CiitaP79621 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CiitaP79621 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CiitaP79621 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CiitaP79621 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CiitaP79621 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CiitaP79621 Efs-202ENSMUST00000227037 2540 ntBASIC15.82■□□□□ 0.12
CiitaP79621 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CiitaP79621 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CiitaP79621 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CiitaP79621 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CiitaP79621 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CiitaP79621 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CiitaP79621 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CiitaP79621 Gm6222-201ENSMUST00000120787 396 ntBASIC15.81■□□□□ 0.12
CiitaP79621 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CiitaP79621 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CiitaP79621 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.81■□□□□ 0.12
CiitaP79621 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CiitaP79621 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CiitaP79621 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CiitaP79621 Gm16476-201ENSMUST00000221544 139 ntBASIC15.81■□□□□ 0.12
CiitaP79621 Gm9063-201ENSMUST00000223299 582 ntBASIC15.81■□□□□ 0.12
CiitaP79621 Shd-206ENSMUST00000225145 998 ntBASIC15.81■□□□□ 0.12
CiitaP79621 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.81■□□□□ 0.12
CiitaP79621 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.81■□□□□ 0.12
CiitaP79621 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CiitaP79621 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CiitaP79621 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CiitaP79621 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CiitaP79621 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CiitaP79621 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
CiitaP79621 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CiitaP79621 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
CiitaP79621 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CiitaP79621 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CiitaP79621 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CiitaP79621 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CiitaP79621 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CiitaP79621 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CiitaP79621 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CiitaP79621 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CiitaP79621 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CiitaP79621 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CiitaP79621 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CiitaP79621 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CiitaP79621 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CiitaP79621 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.8■□□□□ 0.12
CiitaP79621 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CiitaP79621 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CiitaP79621 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CiitaP79621 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CiitaP79621 Gm14767-201ENSMUST00000121559 586 ntBASIC15.8■□□□□ 0.12
CiitaP79621 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CiitaP79621 Gm27321-201ENSMUST00000185021 205 ntBASIC15.8■□□□□ 0.12
CiitaP79621 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CiitaP79621 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CiitaP79621 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CiitaP79621 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CiitaP79621 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CiitaP79621 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CiitaP79621 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CiitaP79621 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CiitaP79621 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CiitaP79621 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CiitaP79621 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.8■□□□□ 0.12
CiitaP79621 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.79■□□□□ 0.12
CiitaP79621 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CiitaP79621 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CiitaP79621 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
CiitaP79621 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CiitaP79621 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CiitaP79621 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CiitaP79621 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CiitaP79621 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CiitaP79621 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CiitaP79621 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CiitaP79621 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CiitaP79621 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CiitaP79621 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CiitaP79621 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CiitaP79621 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.79■□□□□ 0.12
CiitaP79621 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CiitaP79621 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CiitaP79621 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CiitaP79621 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CiitaP79621 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CiitaP79621 Gm7775-201ENSMUST00000218871 853 ntBASIC15.79■□□□□ 0.12
CiitaP79621 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CiitaP79621 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CiitaP79621 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CiitaP79621 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CiitaP79621 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CiitaP79621 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CiitaP79621 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CiitaP79621 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CiitaP79621 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CiitaP79621 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms