Protein–RNA interactions for Protein: P56481

Cckbr, Gastrin/cholecystokinin type B receptor, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CckbrP56481 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CckbrP56481 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CckbrP56481 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CckbrP56481 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CckbrP56481 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CckbrP56481 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CckbrP56481 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
CckbrP56481 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CckbrP56481 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.54□□□□□ -0.24
CckbrP56481 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CckbrP56481 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CckbrP56481 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CckbrP56481 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CckbrP56481 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CckbrP56481 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CckbrP56481 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CckbrP56481 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
CckbrP56481 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CckbrP56481 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CckbrP56481 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CckbrP56481 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CckbrP56481 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CckbrP56481 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CckbrP56481 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CckbrP56481 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CckbrP56481 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CckbrP56481 Gm6973-201ENSMUST00000117080 721 ntBASIC13.53□□□□□ -0.24
CckbrP56481 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.53□□□□□ -0.24
CckbrP56481 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.53□□□□□ -0.24
CckbrP56481 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CckbrP56481 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.53□□□□□ -0.24
CckbrP56481 Gm18057-201ENSMUST00000208220 503 ntBASIC13.53□□□□□ -0.24
CckbrP56481 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.53□□□□□ -0.24
CckbrP56481 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.53□□□□□ -0.24
CckbrP56481 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CckbrP56481 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CckbrP56481 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.53□□□□□ -0.24
CckbrP56481 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CckbrP56481 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CckbrP56481 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CckbrP56481 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CckbrP56481 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CckbrP56481 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.53□□□□□ -0.24
CckbrP56481 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
CckbrP56481 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
CckbrP56481 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CckbrP56481 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CckbrP56481 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CckbrP56481 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CckbrP56481 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
CckbrP56481 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CckbrP56481 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CckbrP56481 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.52□□□□□ -0.24
CckbrP56481 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CckbrP56481 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
CckbrP56481 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CckbrP56481 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CckbrP56481 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CckbrP56481 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CckbrP56481 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
CckbrP56481 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
CckbrP56481 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.52□□□□□ -0.25
CckbrP56481 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CckbrP56481 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CckbrP56481 Gm9726-201ENSMUST00000180321 678 ntBASIC13.52□□□□□ -0.25
CckbrP56481 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.52□□□□□ -0.25
CckbrP56481 Gm2451-201ENSMUST00000199447 999 ntBASIC13.52□□□□□ -0.25
CckbrP56481 Gm10290-201ENSMUST00000200451 999 ntBASIC13.52□□□□□ -0.25
CckbrP56481 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
CckbrP56481 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CckbrP56481 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CckbrP56481 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
CckbrP56481 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CckbrP56481 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.25
CckbrP56481 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.52□□□□□ -0.25
CckbrP56481 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CckbrP56481 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CckbrP56481 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.52□□□□□ -0.25
CckbrP56481 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CckbrP56481 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CckbrP56481 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CckbrP56481 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CckbrP56481 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.52□□□□□ -0.25
CckbrP56481 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CckbrP56481 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CckbrP56481 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CckbrP56481 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CckbrP56481 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CckbrP56481 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.51□□□□□ -0.25
CckbrP56481 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CckbrP56481 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CckbrP56481 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CckbrP56481 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CckbrP56481 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CckbrP56481 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CckbrP56481 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CckbrP56481 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.51□□□□□ -0.25
CckbrP56481 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CckbrP56481 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.51□□□□□ -0.25
CckbrP56481 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms