Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox1P53783 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Sox1P53783 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sox1P53783 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sox1P53783 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox1P53783 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox1P53783 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Sox1P53783 Gm12928-201ENSMUST00000117115 573 ntBASIC14.83□□□□□ -0.04
Sox1P53783 Gm15460-201ENSMUST00000118147 391 ntBASIC14.83□□□□□ -0.04
Sox1P53783 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.83□□□□□ -0.04
Sox1P53783 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC14.83□□□□□ -0.04
Sox1P53783 Gm7593-201ENSMUST00000187246 644 ntBASIC14.83□□□□□ -0.04
Sox1P53783 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.83□□□□□ -0.04
Sox1P53783 Gm33320-201ENSMUST00000192232 530 ntBASIC14.83□□□□□ -0.04
Sox1P53783 Gm43138-201ENSMUST00000199123 708 ntBASIC14.83□□□□□ -0.04
Sox1P53783 Gm45098-201ENSMUST00000207179 657 ntBASIC14.83□□□□□ -0.04
Sox1P53783 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox1P53783 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox1P53783 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Sox1P53783 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Sox1P53783 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox1P53783 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.83□□□□□ -0.04
Sox1P53783 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox1P53783 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox1P53783 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Sox1P53783 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.83□□□□□ -0.04
Sox1P53783 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.83□□□□□ -0.04
Sox1P53783 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.83□□□□□ -0.04
Sox1P53783 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox1P53783 Gm43289-201ENSMUST00000200537 1475 ntBASIC14.82□□□□□ -0.04
Sox1P53783 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox1P53783 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Sox1P53783 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox1P53783 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Sox1P53783 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox1P53783 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox1P53783 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox1P53783 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Sox1P53783 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.82□□□□□ -0.04
Sox1P53783 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Sox1P53783 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC14.82□□□□□ -0.04
Sox1P53783 AU022133-201ENSMUST00000200601 873 ntBASIC14.82□□□□□ -0.04
Sox1P53783 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sox1P53783 Nsd1-205ENSMUST00000224693 852 ntBASIC14.82□□□□□ -0.04
Sox1P53783 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox1P53783 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox1P53783 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox1P53783 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox1P53783 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Sox1P53783 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox1P53783 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Sox1P53783 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Sox1P53783 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sox1P53783 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.82□□□□□ -0.04
Sox1P53783 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.82□□□□□ -0.04
Sox1P53783 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.82□□□□□ -0.04
Sox1P53783 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox1P53783 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Sox1P53783 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox1P53783 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox1P53783 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox1P53783 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox1P53783 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox1P53783 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox1P53783 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox1P53783 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox1P53783 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sox1P53783 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox1P53783 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sox1P53783 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Sox1P53783 Gm15429-201ENSMUST00000151268 798 ntBASIC14.81□□□□□ -0.04
Sox1P53783 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sox1P53783 Gm38002-201ENSMUST00000193255 180 ntBASIC14.81□□□□□ -0.04
Sox1P53783 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Sox1P53783 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.81□□□□□ -0.04
Sox1P53783 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox1P53783 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox1P53783 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox1P53783 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Sox1P53783 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox1P53783 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Sox1P53783 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox1P53783 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sox1P53783 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sox1P53783 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sox1P53783 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.81□□□□□ -0.04
Sox1P53783 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox1P53783 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox1P53783 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Sox1P53783 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox1P53783 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sox1P53783 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox1P53783 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox1P53783 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox1P53783 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox1P53783 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox1P53783 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sox1P53783 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox1P53783 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox1P53783 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms