Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.51□□□□□ -0.25
Foxa1P35582 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Foxa1P35582 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Foxa1P35582 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Foxa1P35582 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Foxa1P35582 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Foxa1P35582 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Foxa1P35582 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Foxa1P35582 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Foxa1P35582 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Foxa1P35582 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Foxa1P35582 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Foxa1P35582 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Foxa1P35582 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Foxa1P35582 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Foxa1P35582 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.51□□□□□ -0.25
Foxa1P35582 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Foxa1P35582 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.51□□□□□ -0.25
Foxa1P35582 Gm6736-201ENSMUST00000166583 948 ntBASIC13.51□□□□□ -0.25
Foxa1P35582 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.51□□□□□ -0.25
Foxa1P35582 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Foxa1P35582 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Foxa1P35582 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Foxa1P35582 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.51□□□□□ -0.25
Foxa1P35582 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Foxa1P35582 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.51□□□□□ -0.25
Foxa1P35582 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Foxa1P35582 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Foxa1P35582 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Foxa1P35582 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Foxa1P35582 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxa1P35582 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxa1P35582 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxa1P35582 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxa1P35582 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxa1P35582 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Foxa1P35582 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Foxa1P35582 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxa1P35582 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.5□□□□□ -0.25
Foxa1P35582 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Foxa1P35582 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Foxa1P35582 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxa1P35582 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Foxa1P35582 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Foxa1P35582 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.5□□□□□ -0.25
Foxa1P35582 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxa1P35582 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Foxa1P35582 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.5□□□□□ -0.25
Foxa1P35582 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Foxa1P35582 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxa1P35582 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Foxa1P35582 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Foxa1P35582 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxa1P35582 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxa1P35582 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Foxa1P35582 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.5□□□□□ -0.25
Foxa1P35582 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Foxa1P35582 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Foxa1P35582 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxa1P35582 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxa1P35582 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxa1P35582 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.5□□□□□ -0.25
Foxa1P35582 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxa1P35582 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Foxa1P35582 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxa1P35582 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxa1P35582 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Foxa1P35582 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.49□□□□□ -0.25
Foxa1P35582 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.49□□□□□ -0.25
Foxa1P35582 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Foxa1P35582 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Foxa1P35582 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Foxa1P35582 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Foxa1P35582 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Foxa1P35582 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.49□□□□□ -0.25
Foxa1P35582 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Foxa1P35582 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Foxa1P35582 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Foxa1P35582 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Foxa1P35582 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Foxa1P35582 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Foxa1P35582 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.49□□□□□ -0.25
Foxa1P35582 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Foxa1P35582 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.49□□□□□ -0.25
Foxa1P35582 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Foxa1P35582 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.49□□□□□ -0.25
Foxa1P35582 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.49□□□□□ -0.25
Foxa1P35582 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Foxa1P35582 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Foxa1P35582 Gm18889-201ENSMUST00000174284 929 ntBASIC13.49□□□□□ -0.25
Foxa1P35582 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Foxa1P35582 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Foxa1P35582 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Foxa1P35582 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Foxa1P35582 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Foxa1P35582 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Foxa1P35582 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Foxa1P35582 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Foxa1P35582 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Foxa1P35582 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms