Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pde6aP27664 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pde6aP27664 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pde6aP27664 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pde6aP27664 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pde6aP27664 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Pde6aP27664 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pde6aP27664 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pde6aP27664 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pde6aP27664 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Pde6aP27664 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC16.93■□□□□ 0.3
Pde6aP27664 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pde6aP27664 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pde6aP27664 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC16.93■□□□□ 0.3
Pde6aP27664 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pde6aP27664 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pde6aP27664 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pde6aP27664 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pde6aP27664 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pde6aP27664 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pde6aP27664 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Pde6aP27664 Gm29541-201ENSMUST00000191351 678 ntBASIC16.93■□□□□ 0.3
Pde6aP27664 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pde6aP27664 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pde6aP27664 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pde6aP27664 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pde6aP27664 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Pde6aP27664 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pde6aP27664 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pde6aP27664 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Pde6aP27664 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Pde6aP27664 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pde6aP27664 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pde6aP27664 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pde6aP27664 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pde6aP27664 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Pde6aP27664 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Pde6aP27664 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pde6aP27664 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Pde6aP27664 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pde6aP27664 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pde6aP27664 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.92■□□□□ 0.3
Pde6aP27664 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Pde6aP27664 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Pde6aP27664 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pde6aP27664 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Pde6aP27664 Gm14701-201ENSMUST00000117156 348 ntBASIC16.92■□□□□ 0.3
Pde6aP27664 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pde6aP27664 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.92■□□□□ 0.3
Pde6aP27664 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC16.92■□□□□ 0.3
Pde6aP27664 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pde6aP27664 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pde6aP27664 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pde6aP27664 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pde6aP27664 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pde6aP27664 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC16.92■□□□□ 0.3
Pde6aP27664 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.92■□□□□ 0.3
Pde6aP27664 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
Pde6aP27664 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.91■□□□□ 0.3
Pde6aP27664 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pde6aP27664 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pde6aP27664 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.91■□□□□ 0.3
Pde6aP27664 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pde6aP27664 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Pde6aP27664 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.91■□□□□ 0.3
Pde6aP27664 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pde6aP27664 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.91■□□□□ 0.3
Pde6aP27664 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Pde6aP27664 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pde6aP27664 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pde6aP27664 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pde6aP27664 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Pde6aP27664 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC16.91■□□□□ 0.3
Pde6aP27664 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.91■□□□□ 0.3
Pde6aP27664 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pde6aP27664 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pde6aP27664 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pde6aP27664 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Pde6aP27664 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Pde6aP27664 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pde6aP27664 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pde6aP27664 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pde6aP27664 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pde6aP27664 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pde6aP27664 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.91■□□□□ 0.3
Pde6aP27664 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pde6aP27664 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pde6aP27664 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pde6aP27664 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Pde6aP27664 Gm44645-201ENSMUST00000205492 1653 ntBASIC16.91■□□□□ 0.3
Pde6aP27664 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pde6aP27664 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pde6aP27664 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pde6aP27664 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pde6aP27664 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pde6aP27664 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pde6aP27664 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pde6aP27664 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pde6aP27664 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pde6aP27664 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms