Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H2afxP27661 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
H2afxP27661 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
H2afxP27661 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
H2afxP27661 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H2afxP27661 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
H2afxP27661 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC15.26■□□□□ 0.03
H2afxP27661 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
H2afxP27661 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
H2afxP27661 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
H2afxP27661 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
H2afxP27661 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H2afxP27661 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H2afxP27661 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H2afxP27661 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
H2afxP27661 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
H2afxP27661 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
H2afxP27661 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afxP27661 Gm37795-201ENSMUST00000194216 2459 ntBASIC15.25■□□□□ 0.03
H2afxP27661 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afxP27661 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afxP27661 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afxP27661 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afxP27661 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afxP27661 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afxP27661 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afxP27661 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
H2afxP27661 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
H2afxP27661 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.25■□□□□ 0.03
H2afxP27661 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
H2afxP27661 Gm25925-201ENSMUST00000158314 306 ntBASIC15.25■□□□□ 0.03
H2afxP27661 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
H2afxP27661 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.25■□□□□ 0.03
H2afxP27661 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
H2afxP27661 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afxP27661 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afxP27661 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
H2afxP27661 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afxP27661 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
H2afxP27661 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
H2afxP27661 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afxP27661 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afxP27661 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.25■□□□□ 0.03
H2afxP27661 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
H2afxP27661 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
H2afxP27661 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afxP27661 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afxP27661 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afxP27661 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afxP27661 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afxP27661 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afxP27661 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afxP27661 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afxP27661 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afxP27661 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afxP27661 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
H2afxP27661 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
H2afxP27661 Gm11355-201ENSMUST00000121120 306 ntBASIC15.24■□□□□ 0.03
H2afxP27661 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
H2afxP27661 Gm21559-201ENSMUST00000220638 855 ntBASIC15.24■□□□□ 0.03
H2afxP27661 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afxP27661 Gm8587-201ENSMUST00000076538 843 ntBASIC15.24■□□□□ 0.03
H2afxP27661 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afxP27661 Gm14752-201ENSMUST00000120719 2075 ntBASIC15.24■□□□□ 0.03
H2afxP27661 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
H2afxP27661 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
H2afxP27661 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
H2afxP27661 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afxP27661 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afxP27661 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
H2afxP27661 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afxP27661 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
H2afxP27661 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afxP27661 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afxP27661 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
H2afxP27661 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
H2afxP27661 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
H2afxP27661 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
H2afxP27661 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afxP27661 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
H2afxP27661 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afxP27661 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
H2afxP27661 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afxP27661 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afxP27661 Ssr1-203ENSMUST00000225246 1825 ntBASIC15.23■□□□□ 0.03
H2afxP27661 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afxP27661 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.23■□□□□ 0.03
H2afxP27661 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afxP27661 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
H2afxP27661 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afxP27661 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afxP27661 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afxP27661 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
H2afxP27661 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.23■□□□□ 0.03
H2afxP27661 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afxP27661 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afxP27661 Gm27194-201ENSMUST00000175753 2936 ntBASIC15.23■□□□□ 0.03
H2afxP27661 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afxP27661 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afxP27661 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms