Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IghmP01872 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IghmP01872 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.68□□□□□ -0.22
IghmP01872 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
IghmP01872 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IghmP01872 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
IghmP01872 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
IghmP01872 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IghmP01872 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
IghmP01872 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IghmP01872 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
IghmP01872 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
IghmP01872 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.68□□□□□ -0.22
IghmP01872 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IghmP01872 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
IghmP01872 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IghmP01872 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
IghmP01872 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.68□□□□□ -0.22
IghmP01872 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
IghmP01872 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IghmP01872 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IghmP01872 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IghmP01872 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
IghmP01872 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
IghmP01872 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IghmP01872 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IghmP01872 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IghmP01872 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IghmP01872 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IghmP01872 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
IghmP01872 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IghmP01872 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
IghmP01872 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
IghmP01872 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IghmP01872 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
IghmP01872 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IghmP01872 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IghmP01872 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IghmP01872 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.67□□□□□ -0.22
IghmP01872 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
IghmP01872 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
IghmP01872 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.67□□□□□ -0.22
IghmP01872 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
IghmP01872 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
IghmP01872 Gm27301-201ENSMUST00000184012 127 ntBASIC13.67□□□□□ -0.22
IghmP01872 Gm37230-201ENSMUST00000194491 818 ntBASIC13.67□□□□□ -0.22
IghmP01872 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
IghmP01872 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.67□□□□□ -0.22
IghmP01872 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
IghmP01872 Gm9182-201ENSMUST00000217829 639 ntBASIC13.67□□□□□ -0.22
IghmP01872 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IghmP01872 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IghmP01872 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
IghmP01872 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IghmP01872 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
IghmP01872 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IghmP01872 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
IghmP01872 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
IghmP01872 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.67□□□□□ -0.22
IghmP01872 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.67□□□□□ -0.22
IghmP01872 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IghmP01872 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
IghmP01872 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IghmP01872 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.67□□□□□ -0.22
IghmP01872 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IghmP01872 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
IghmP01872 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
IghmP01872 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
IghmP01872 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IghmP01872 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IghmP01872 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
IghmP01872 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.66□□□□□ -0.22
IghmP01872 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
IghmP01872 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
IghmP01872 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IghmP01872 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
IghmP01872 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
IghmP01872 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
IghmP01872 Gm14140-201ENSMUST00000119999 995 ntBASIC13.66□□□□□ -0.22
IghmP01872 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.66□□□□□ -0.22
IghmP01872 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IghmP01872 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IghmP01872 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IghmP01872 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IghmP01872 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IghmP01872 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IghmP01872 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.66□□□□□ -0.22
IghmP01872 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IghmP01872 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
IghmP01872 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IghmP01872 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
IghmP01872 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IghmP01872 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
IghmP01872 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
IghmP01872 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
IghmP01872 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
IghmP01872 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
IghmP01872 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
IghmP01872 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
IghmP01872 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms