Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Gm44333-201ENSMUST00000197168 107 ntBASIC13.25□□□□□ -0.29
Lmx1bO88609 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.25□□□□□ -0.29
Lmx1bO88609 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.25□□□□□ -0.29
Lmx1bO88609 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.25□□□□□ -0.29
Lmx1bO88609 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lmx1bO88609 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lmx1bO88609 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lmx1bO88609 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lmx1bO88609 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Lmx1bO88609 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lmx1bO88609 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.25□□□□□ -0.29
Lmx1bO88609 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lmx1bO88609 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lmx1bO88609 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lmx1bO88609 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Lmx1bO88609 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lmx1bO88609 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lmx1bO88609 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lmx1bO88609 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lmx1bO88609 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lmx1bO88609 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lmx1bO88609 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.24□□□□□ -0.29
Lmx1bO88609 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lmx1bO88609 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lmx1bO88609 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
Lmx1bO88609 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lmx1bO88609 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lmx1bO88609 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lmx1bO88609 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Lmx1bO88609 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lmx1bO88609 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Lmx1bO88609 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Lmx1bO88609 Gm38225-201ENSMUST00000194001 393 ntBASIC13.24□□□□□ -0.29
Lmx1bO88609 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lmx1bO88609 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.24□□□□□ -0.29
Lmx1bO88609 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.24□□□□□ -0.29
Lmx1bO88609 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lmx1bO88609 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Lmx1bO88609 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Lmx1bO88609 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lmx1bO88609 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lmx1bO88609 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
Lmx1bO88609 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lmx1bO88609 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lmx1bO88609 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Lmx1bO88609 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lmx1bO88609 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Lmx1bO88609 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lmx1bO88609 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lmx1bO88609 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lmx1bO88609 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Lmx1bO88609 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lmx1bO88609 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.24□□□□□ -0.29
Lmx1bO88609 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lmx1bO88609 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lmx1bO88609 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.23□□□□□ -0.29
Lmx1bO88609 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
Lmx1bO88609 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lmx1bO88609 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lmx1bO88609 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lmx1bO88609 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lmx1bO88609 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lmx1bO88609 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.23□□□□□ -0.29
Lmx1bO88609 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Lmx1bO88609 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Lmx1bO88609 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lmx1bO88609 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lmx1bO88609 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lmx1bO88609 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lmx1bO88609 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lmx1bO88609 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Lmx1bO88609 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.23□□□□□ -0.29
Lmx1bO88609 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.23□□□□□ -0.29
Lmx1bO88609 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lmx1bO88609 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Lmx1bO88609 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.23□□□□□ -0.29
Lmx1bO88609 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lmx1bO88609 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.23□□□□□ -0.29
Lmx1bO88609 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Lmx1bO88609 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lmx1bO88609 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lmx1bO88609 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lmx1bO88609 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lmx1bO88609 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lmx1bO88609 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lmx1bO88609 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Lmx1bO88609 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Lmx1bO88609 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lmx1bO88609 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lmx1bO88609 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Lmx1bO88609 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lmx1bO88609 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.23□□□□□ -0.29
Lmx1bO88609 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lmx1bO88609 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lmx1bO88609 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lmx1bO88609 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lmx1bO88609 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Lmx1bO88609 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Lmx1bO88609 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lmx1bO88609 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms