Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cops4O88544 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
Cops4O88544 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cops4O88544 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Cops4O88544 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cops4O88544 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cops4O88544 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cops4O88544 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cops4O88544 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cops4O88544 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cops4O88544 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cops4O88544 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cops4O88544 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cops4O88544 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cops4O88544 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Cops4O88544 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.51□□□□□ -0.25
Cops4O88544 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.51□□□□□ -0.25
Cops4O88544 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.51□□□□□ -0.25
Cops4O88544 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.51□□□□□ -0.25
Cops4O88544 Gm8655-201ENSMUST00000221159 852 ntBASIC13.51□□□□□ -0.25
Cops4O88544 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cops4O88544 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cops4O88544 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Cops4O88544 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cops4O88544 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cops4O88544 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cops4O88544 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cops4O88544 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cops4O88544 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.5□□□□□ -0.25
Cops4O88544 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.5□□□□□ -0.25
Cops4O88544 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cops4O88544 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Cops4O88544 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cops4O88544 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.5□□□□□ -0.25
Cops4O88544 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cops4O88544 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Cops4O88544 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cops4O88544 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.5□□□□□ -0.25
Cops4O88544 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cops4O88544 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cops4O88544 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cops4O88544 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cops4O88544 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Cops4O88544 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cops4O88544 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cops4O88544 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cops4O88544 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cops4O88544 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cops4O88544 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cops4O88544 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cops4O88544 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.5□□□□□ -0.25
Cops4O88544 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cops4O88544 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cops4O88544 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cops4O88544 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.49□□□□□ -0.25
Cops4O88544 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Cops4O88544 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cops4O88544 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cops4O88544 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Cops4O88544 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cops4O88544 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cops4O88544 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cops4O88544 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cops4O88544 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Cops4O88544 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Cops4O88544 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.49□□□□□ -0.25
Cops4O88544 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.49□□□□□ -0.25
Cops4O88544 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.49□□□□□ -0.25
Cops4O88544 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cops4O88544 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cops4O88544 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cops4O88544 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.49□□□□□ -0.25
Cops4O88544 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13.49□□□□□ -0.25
Cops4O88544 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Cops4O88544 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cops4O88544 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cops4O88544 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cops4O88544 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cops4O88544 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cops4O88544 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cops4O88544 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cops4O88544 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cops4O88544 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cops4O88544 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cops4O88544 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.48□□□□□ -0.25
Cops4O88544 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cops4O88544 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cops4O88544 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cops4O88544 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cops4O88544 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cops4O88544 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cops4O88544 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cops4O88544 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cops4O88544 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cops4O88544 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cops4O88544 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Cops4O88544 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Cops4O88544 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cops4O88544 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.48□□□□□ -0.25
Cops4O88544 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms