Protein–RNA interactions for Protein: O70258

Sgce, Epsilon-sarcoglycan, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgceO70258 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SgceO70258 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgceO70258 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
SgceO70258 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.08□□□□□ -0.32
SgceO70258 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SgceO70258 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SgceO70258 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SgceO70258 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgceO70258 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgceO70258 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgceO70258 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgceO70258 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgceO70258 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
SgceO70258 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgceO70258 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgceO70258 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgceO70258 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.08□□□□□ -0.32
SgceO70258 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgceO70258 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgceO70258 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgceO70258 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
SgceO70258 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgceO70258 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgceO70258 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgceO70258 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgceO70258 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgceO70258 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgceO70258 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgceO70258 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SgceO70258 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SgceO70258 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SgceO70258 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.07□□□□□ -0.32
SgceO70258 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SgceO70258 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.07□□□□□ -0.32
SgceO70258 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgceO70258 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.07□□□□□ -0.32
SgceO70258 Gm13597-201ENSMUST00000121239 375 ntBASIC13.07□□□□□ -0.32
SgceO70258 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.07□□□□□ -0.32
SgceO70258 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.07□□□□□ -0.32
SgceO70258 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SgceO70258 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.07□□□□□ -0.32
SgceO70258 Psmb5-202ENSMUST00000227257 622 ntBASIC13.07□□□□□ -0.32
SgceO70258 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgceO70258 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgceO70258 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SgceO70258 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgceO70258 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgceO70258 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgceO70258 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.07□□□□□ -0.32
SgceO70258 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgceO70258 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.07□□□□□ -0.32
SgceO70258 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SgceO70258 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgceO70258 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
SgceO70258 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgceO70258 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SgceO70258 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
SgceO70258 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgceO70258 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgceO70258 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgceO70258 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgceO70258 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgceO70258 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgceO70258 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SgceO70258 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
SgceO70258 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgceO70258 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SgceO70258 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgceO70258 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.06□□□□□ -0.32
SgceO70258 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.06□□□□□ -0.32
SgceO70258 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.06□□□□□ -0.32
SgceO70258 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.06□□□□□ -0.32
SgceO70258 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.06□□□□□ -0.32
SgceO70258 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.06□□□□□ -0.32
SgceO70258 Gm2272-201ENSMUST00000194903 582 ntBASIC13.06□□□□□ -0.32
SgceO70258 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.06□□□□□ -0.32
SgceO70258 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SgceO70258 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgceO70258 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgceO70258 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgceO70258 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgceO70258 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgceO70258 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgceO70258 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgceO70258 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
SgceO70258 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
SgceO70258 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
SgceO70258 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgceO70258 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SgceO70258 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.05□□□□□ -0.32
SgceO70258 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SgceO70258 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SgceO70258 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SgceO70258 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
SgceO70258 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SgceO70258 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SgceO70258 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SgceO70258 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.05□□□□□ -0.32
SgceO70258 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SgceO70258 Gm1401-201ENSMUST00000122048 772 ntBASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms