Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gfra3O35118 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gfra3O35118 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gfra3O35118 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Gfra3O35118 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.66□□□□□ -0.38
Gfra3O35118 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gfra3O35118 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gfra3O35118 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gfra3O35118 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gfra3O35118 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gfra3O35118 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gfra3O35118 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Gfra3O35118 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gfra3O35118 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gfra3O35118 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Gfra3O35118 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gfra3O35118 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gfra3O35118 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gfra3O35118 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gfra3O35118 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Gfra3O35118 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gfra3O35118 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gfra3O35118 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gfra3O35118 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Gfra3O35118 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.65□□□□□ -0.38
Gfra3O35118 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Gfra3O35118 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Gfra3O35118 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Gfra3O35118 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Gfra3O35118 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gfra3O35118 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gfra3O35118 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gfra3O35118 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gfra3O35118 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Gfra3O35118 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gfra3O35118 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Gfra3O35118 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.65□□□□□ -0.38
Gfra3O35118 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.65□□□□□ -0.38
Gfra3O35118 Gm19324-201ENSMUST00000213229 1169 ntBASIC12.65□□□□□ -0.38
Gfra3O35118 Gm5779-201ENSMUST00000218467 910 ntBASIC12.65□□□□□ -0.38
Gfra3O35118 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gfra3O35118 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gfra3O35118 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gfra3O35118 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.65□□□□□ -0.38
Gfra3O35118 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Gfra3O35118 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Gfra3O35118 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gfra3O35118 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gfra3O35118 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gfra3O35118 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gfra3O35118 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gfra3O35118 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gfra3O35118 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gfra3O35118 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Gfra3O35118 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Gfra3O35118 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Gfra3O35118 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Gfra3O35118 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Gfra3O35118 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.65□□□□□ -0.39
Gfra3O35118 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gfra3O35118 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gfra3O35118 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gfra3O35118 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.64□□□□□ -0.39
Gfra3O35118 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gfra3O35118 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.64□□□□□ -0.39
Gfra3O35118 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gfra3O35118 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gfra3O35118 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gfra3O35118 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gfra3O35118 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gfra3O35118 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gfra3O35118 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gfra3O35118 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.64□□□□□ -0.39
Gfra3O35118 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gfra3O35118 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gfra3O35118 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.64□□□□□ -0.39
Gfra3O35118 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.64□□□□□ -0.39
Gfra3O35118 Gm9824-201ENSMUST00000178707 561 ntBASIC12.64□□□□□ -0.39
Gfra3O35118 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gfra3O35118 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.64□□□□□ -0.39
Gfra3O35118 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.64□□□□□ -0.39
Gfra3O35118 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gfra3O35118 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gfra3O35118 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gfra3O35118 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gfra3O35118 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.64□□□□□ -0.39
Gfra3O35118 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gfra3O35118 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gfra3O35118 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.64□□□□□ -0.39
Gfra3O35118 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gfra3O35118 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gfra3O35118 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gfra3O35118 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gfra3O35118 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gfra3O35118 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gfra3O35118 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gfra3O35118 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gfra3O35118 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gfra3O35118 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gfra3O35118 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms