Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trove2O08848 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trove2O08848 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trove2O08848 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trove2O08848 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC15.02■□□□□ -0
Trove2O08848 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.02■□□□□ -0
Trove2O08848 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trove2O08848 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trove2O08848 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trove2O08848 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trove2O08848 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trove2O08848 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trove2O08848 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.02■□□□□ -0
Trove2O08848 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.02■□□□□ -0
Trove2O08848 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Trove2O08848 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trove2O08848 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trove2O08848 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trove2O08848 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Trove2O08848 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trove2O08848 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trove2O08848 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Trove2O08848 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Trove2O08848 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Trove2O08848 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trove2O08848 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trove2O08848 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Trove2O08848 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trove2O08848 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.01□□□□□ -0.01
Trove2O08848 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trove2O08848 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trove2O08848 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trove2O08848 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trove2O08848 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trove2O08848 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Trove2O08848 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trove2O08848 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trove2O08848 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Trove2O08848 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trove2O08848 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.01□□□□□ -0.01
Trove2O08848 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trove2O08848 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.01□□□□□ -0.01
Trove2O08848 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.01□□□□□ -0.01
Trove2O08848 Gm10819-201ENSMUST00000099988 561 ntBASIC15.01□□□□□ -0.01
Trove2O08848 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trove2O08848 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trove2O08848 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Trove2O08848 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trove2O08848 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trove2O08848 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trove2O08848 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trove2O08848 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trove2O08848 AC166574.6-201ENSMUST00000227889 1806 ntBASIC15.01□□□□□ -0.01
Trove2O08848 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trove2O08848 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trove2O08848 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trove2O08848 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC15.01□□□□□ -0.01
Trove2O08848 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trove2O08848 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
Trove2O08848 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trove2O08848 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15□□□□□ -0.01
Trove2O08848 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trove2O08848 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trove2O08848 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trove2O08848 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trove2O08848 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trove2O08848 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trove2O08848 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trove2O08848 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Trove2O08848 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trove2O08848 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15□□□□□ -0.01
Trove2O08848 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15□□□□□ -0.01
Trove2O08848 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15□□□□□ -0.01
Trove2O08848 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15□□□□□ -0.01
Trove2O08848 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trove2O08848 Gm7286-201ENSMUST00000182691 1007 ntBASIC15□□□□□ -0.01
Trove2O08848 Birc2-201ENSMUST00000054878 378 ntBASIC15□□□□□ -0.01
Trove2O08848 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trove2O08848 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trove2O08848 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trove2O08848 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trove2O08848 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trove2O08848 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trove2O08848 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trove2O08848 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trove2O08848 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trove2O08848 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trove2O08848 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trove2O08848 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trove2O08848 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trove2O08848 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trove2O08848 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Trove2O08848 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trove2O08848 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trove2O08848 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trove2O08848 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trove2O08848 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trove2O08848 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trove2O08848 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trove2O08848 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms