Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.16□□□□□ -0.3
Pcdh1F7BJK1 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh1F7BJK1 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh1F7BJK1 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdh1F7BJK1 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.15□□□□□ -0.3
Pcdh1F7BJK1 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh1F7BJK1 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh1F7BJK1 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh1F7BJK1 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh1F7BJK1 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.15□□□□□ -0.3
Pcdh1F7BJK1 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh1F7BJK1 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh1F7BJK1 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh1F7BJK1 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.15□□□□□ -0.3
Pcdh1F7BJK1 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh1F7BJK1 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh1F7BJK1 Gm13418-201ENSMUST00000119097 944 ntBASIC13.15□□□□□ -0.3
Pcdh1F7BJK1 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.15□□□□□ -0.3
Pcdh1F7BJK1 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh1F7BJK1 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.15□□□□□ -0.3
Pcdh1F7BJK1 Gm6089-201ENSMUST00000197666 938 ntBASIC13.15□□□□□ -0.3
Pcdh1F7BJK1 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.15□□□□□ -0.3
Pcdh1F7BJK1 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.15□□□□□ -0.3
Pcdh1F7BJK1 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh1F7BJK1 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh1F7BJK1 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Pcdh1F7BJK1 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Pcdh1F7BJK1 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh1F7BJK1 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Pcdh1F7BJK1 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh1F7BJK1 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh1F7BJK1 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh1F7BJK1 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh1F7BJK1 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh1F7BJK1 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh1F7BJK1 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.15□□□□□ -0.31
Pcdh1F7BJK1 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdh1F7BJK1 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdh1F7BJK1 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdh1F7BJK1 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh1F7BJK1 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh1F7BJK1 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh1F7BJK1 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh1F7BJK1 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pcdh1F7BJK1 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh1F7BJK1 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Pcdh1F7BJK1 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Pcdh1F7BJK1 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh1F7BJK1 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh1F7BJK1 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Pcdh1F7BJK1 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh1F7BJK1 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdh1F7BJK1 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.14□□□□□ -0.31
Pcdh1F7BJK1 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.14□□□□□ -0.31
Pcdh1F7BJK1 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pcdh1F7BJK1 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh1F7BJK1 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh1F7BJK1 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Pcdh1F7BJK1 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.14□□□□□ -0.31
Pcdh1F7BJK1 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pcdh1F7BJK1 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Pcdh1F7BJK1 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh1F7BJK1 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh1F7BJK1 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh1F7BJK1 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pcdh1F7BJK1 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh1F7BJK1 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pcdh1F7BJK1 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pcdh1F7BJK1 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh1F7BJK1 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh1F7BJK1 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh1F7BJK1 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh1F7BJK1 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh1F7BJK1 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh1F7BJK1 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.13□□□□□ -0.31
Pcdh1F7BJK1 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh1F7BJK1 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Pcdh1F7BJK1 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh1F7BJK1 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh1F7BJK1 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh1F7BJK1 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh1F7BJK1 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdh1F7BJK1 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdh1F7BJK1 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh1F7BJK1 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh1F7BJK1 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh1F7BJK1 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdh1F7BJK1 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh1F7BJK1 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdh1F7BJK1 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh1F7BJK1 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh1F7BJK1 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdh1F7BJK1 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.13□□□□□ -0.31
Pcdh1F7BJK1 Gm43347-201ENSMUST00000200226 580 ntBASIC13.13□□□□□ -0.31
Pcdh1F7BJK1 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC13.13□□□□□ -0.31
Pcdh1F7BJK1 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdh1F7BJK1 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh1F7BJK1 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh1F7BJK1 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh1F7BJK1 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms