Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Gm28043E0CXC2 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Gm28043E0CXC2 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Gm28043E0CXC2 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Gm28043E0CXC2 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Gm28043E0CXC2 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Gm28043E0CXC2 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Gm28043E0CXC2 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Gm28043E0CXC2 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Gm28043E0CXC2 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Gm28043E0CXC2 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Gm28043E0CXC2 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Gm28043E0CXC2 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Gm28043E0CXC2 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
Gm28043E0CXC2 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Gm28043E0CXC2 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Gm28043E0CXC2 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Gm28043E0CXC2 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Gm28043E0CXC2 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.68□□□□□ -0.06
Gm28043E0CXC2 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.68□□□□□ -0.06
Gm28043E0CXC2 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.68□□□□□ -0.06
Gm28043E0CXC2 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Gm28043E0CXC2 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Gm28043E0CXC2 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Gm28043E0CXC2 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Gm28043E0CXC2 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Gm28043E0CXC2 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Gm28043E0CXC2 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Gm28043E0CXC2 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Gm28043E0CXC2 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Gm28043E0CXC2 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Gm28043E0CXC2 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Gm28043E0CXC2 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Gm28043E0CXC2 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Gm28043E0CXC2 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.68□□□□□ -0.06
Gm28043E0CXC2 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Gm28043E0CXC2 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gm28043E0CXC2 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.67□□□□□ -0.06
Gm28043E0CXC2 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Gm28043E0CXC2 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Gm28043E0CXC2 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.67□□□□□ -0.06
Gm28043E0CXC2 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gm28043E0CXC2 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Gm28043E0CXC2 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gm28043E0CXC2 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gm28043E0CXC2 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gm28043E0CXC2 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gm28043E0CXC2 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gm28043E0CXC2 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gm28043E0CXC2 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Gm28043E0CXC2 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.67□□□□□ -0.06
Gm28043E0CXC2 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Gm28043E0CXC2 Mir5131-201ENSMUST00000175426 93 ntBASIC14.67□□□□□ -0.06
Gm28043E0CXC2 Mir5126-201ENSMUST00000175513 77 ntBASIC14.67□□□□□ -0.06
Gm28043E0CXC2 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.67□□□□□ -0.06
Gm28043E0CXC2 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.67□□□□□ -0.06
Gm28043E0CXC2 Gm9682-201ENSMUST00000197505 556 ntBASIC14.67□□□□□ -0.06
Gm28043E0CXC2 Gm7461-201ENSMUST00000058918 827 ntBASIC14.67□□□□□ -0.06
Gm28043E0CXC2 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gm28043E0CXC2 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Gm28043E0CXC2 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gm28043E0CXC2 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Gm28043E0CXC2 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Gm28043E0CXC2 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.67□□□□□ -0.06
Gm28043E0CXC2 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Gm28043E0CXC2 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gm28043E0CXC2 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gm28043E0CXC2 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Gm28043E0CXC2 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gm28043E0CXC2 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gm28043E0CXC2 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gm28043E0CXC2 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Gm28043E0CXC2 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gm28043E0CXC2 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gm28043E0CXC2 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gm28043E0CXC2 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gm28043E0CXC2 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Gm28043E0CXC2 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gm28043E0CXC2 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Gm28043E0CXC2 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Gm28043E0CXC2 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.66□□□□□ -0.06
Gm28043E0CXC2 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Gm28043E0CXC2 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gm28043E0CXC2 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gm28043E0CXC2 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gm28043E0CXC2 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Gm28043E0CXC2 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gm28043E0CXC2 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gm28043E0CXC2 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Gm28043E0CXC2 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.66□□□□□ -0.06
Gm28043E0CXC2 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.66□□□□□ -0.06
Gm28043E0CXC2 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gm28043E0CXC2 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gm28043E0CXC2 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Gm28043E0CXC2 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gm28043E0CXC2 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gm28043E0CXC2 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.66□□□□□ -0.06
Gm28043E0CXC2 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gm28043E0CXC2 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Gm28043E0CXC2 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms