Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 AC121801.1-201ENSMUST00000225363 1899 ntBASIC11.87□□□□□ -0.51
Nkx6-2D3Z4R4 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC11.87□□□□□ -0.51
Nkx6-2D3Z4R4 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx6-2D3Z4R4 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx6-2D3Z4R4 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx6-2D3Z4R4 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC11.87□□□□□ -0.51
Nkx6-2D3Z4R4 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx6-2D3Z4R4 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx6-2D3Z4R4 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Nkx6-2D3Z4R4 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
Nkx6-2D3Z4R4 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC11.87□□□□□ -0.51
Nkx6-2D3Z4R4 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.87□□□□□ -0.51
Nkx6-2D3Z4R4 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC11.87□□□□□ -0.51
Nkx6-2D3Z4R4 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC11.87□□□□□ -0.51
Nkx6-2D3Z4R4 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx6-2D3Z4R4 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx6-2D3Z4R4 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC11.87□□□□□ -0.51
Nkx6-2D3Z4R4 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC11.87□□□□□ -0.51
Nkx6-2D3Z4R4 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx6-2D3Z4R4 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC11.87□□□□□ -0.51
Nkx6-2D3Z4R4 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx6-2D3Z4R4 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Nkx6-2D3Z4R4 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.87□□□□□ -0.51
Nkx6-2D3Z4R4 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Nkx6-2D3Z4R4 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx6-2D3Z4R4 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx6-2D3Z4R4 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx6-2D3Z4R4 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.87□□□□□ -0.51
Nkx6-2D3Z4R4 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Nkx6-2D3Z4R4 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-2D3Z4R4 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Nkx6-2D3Z4R4 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-2D3Z4R4 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-2D3Z4R4 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-2D3Z4R4 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-2D3Z4R4 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-2D3Z4R4 Gm27275-201ENSMUST00000184318 272 ntBASIC11.86□□□□□ -0.51
Nkx6-2D3Z4R4 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Nkx6-2D3Z4R4 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-2D3Z4R4 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-2D3Z4R4 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-2D3Z4R4 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-2D3Z4R4 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-2D3Z4R4 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Nkx6-2D3Z4R4 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-2D3Z4R4 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-2D3Z4R4 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-2D3Z4R4 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-2D3Z4R4 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-2D3Z4R4 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.86□□□□□ -0.51
Nkx6-2D3Z4R4 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-2D3Z4R4 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-2D3Z4R4 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx6-2D3Z4R4 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx6-2D3Z4R4 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.85□□□□□ -0.51
Nkx6-2D3Z4R4 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx6-2D3Z4R4 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx6-2D3Z4R4 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx6-2D3Z4R4 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Nkx6-2D3Z4R4 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx6-2D3Z4R4 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx6-2D3Z4R4 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.85□□□□□ -0.51
Nkx6-2D3Z4R4 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx6-2D3Z4R4 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC11.85□□□□□ -0.51
Nkx6-2D3Z4R4 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Nkx6-2D3Z4R4 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx6-2D3Z4R4 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx6-2D3Z4R4 Gm6858-201ENSMUST00000208582 1468 ntBASIC11.85□□□□□ -0.51
Nkx6-2D3Z4R4 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx6-2D3Z4R4 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx6-2D3Z4R4 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx6-2D3Z4R4 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Nkx6-2D3Z4R4 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx6-2D3Z4R4 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx6-2D3Z4R4 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx6-2D3Z4R4 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx6-2D3Z4R4 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Nkx6-2D3Z4R4 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.85□□□□□ -0.51
Nkx6-2D3Z4R4 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx6-2D3Z4R4 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx6-2D3Z4R4 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.85□□□□□ -0.51
Nkx6-2D3Z4R4 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx6-2D3Z4R4 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC11.85□□□□□ -0.51
Nkx6-2D3Z4R4 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx6-2D3Z4R4 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Nkx6-2D3Z4R4 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Nkx6-2D3Z4R4 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx6-2D3Z4R4 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx6-2D3Z4R4 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx6-2D3Z4R4 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx6-2D3Z4R4 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx6-2D3Z4R4 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx6-2D3Z4R4 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx6-2D3Z4R4 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx6-2D3Z4R4 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx6-2D3Z4R4 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx6-2D3Z4R4 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx6-2D3Z4R4 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx6-2D3Z4R4 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx6-2D3Z4R4 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms