Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usf3B2RUQ2 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Usf3B2RUQ2 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Usf3B2RUQ2 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.2□□□□□ -0.46
Usf3B2RUQ2 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usf3B2RUQ2 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Usf3B2RUQ2 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usf3B2RUQ2 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usf3B2RUQ2 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.2□□□□□ -0.46
Usf3B2RUQ2 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Usf3B2RUQ2 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Usf3B2RUQ2 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usf3B2RUQ2 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Usf3B2RUQ2 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Usf3B2RUQ2 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usf3B2RUQ2 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usf3B2RUQ2 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Usf3B2RUQ2 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Usf3B2RUQ2 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Usf3B2RUQ2 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usf3B2RUQ2 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usf3B2RUQ2 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.2□□□□□ -0.46
Usf3B2RUQ2 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.2□□□□□ -0.46
Usf3B2RUQ2 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Rpph1-201ENSMUST00000175096 319 ntBASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Gm27622-201ENSMUST00000183779 60 ntBASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Gm25857-201ENSMUST00000082788 129 ntBASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usf3B2RUQ2 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usf3B2RUQ2 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usf3B2RUQ2 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usf3B2RUQ2 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Usf3B2RUQ2 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usf3B2RUQ2 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Usf3B2RUQ2 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usf3B2RUQ2 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.18□□□□□ -0.46
Usf3B2RUQ2 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.18□□□□□ -0.46
Usf3B2RUQ2 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usf3B2RUQ2 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usf3B2RUQ2 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Usf3B2RUQ2 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Usf3B2RUQ2 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usf3B2RUQ2 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usf3B2RUQ2 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Usf3B2RUQ2 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Usf3B2RUQ2 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Usf3B2RUQ2 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Usf3B2RUQ2 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Usf3B2RUQ2 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usf3B2RUQ2 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usf3B2RUQ2 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usf3B2RUQ2 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Usf3B2RUQ2 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Usf3B2RUQ2 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.18□□□□□ -0.46
Usf3B2RUQ2 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms