Protein–RNA interactions for Protein: A0A1W2P7H6

Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4b-psA0A1W2P7H6 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.43■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Gm13015-201ENSMUST00000118674 204 ntBASIC15.43■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.43■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.43■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.43■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.43■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.43■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.42■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.42■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.42■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.42■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.42■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.42■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.42■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.42■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.41■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Gm27430-201ENSMUST00000184585 107 ntBASIC15.41■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Gm44333-201ENSMUST00000197168 107 ntBASIC15.41■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.41■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.41■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.4■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Mindy4b-psA0A1W2P7H6 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms