Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav21-dv12A0A075B6C4 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav21-dv12A0A075B6C4 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav21-dv12A0A075B6C4 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trav21-dv12A0A075B6C4 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav21-dv12A0A075B6C4 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav21-dv12A0A075B6C4 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav21-dv12A0A075B6C4 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 AC131709.1-201ENSMUST00000224731 1180 ntBASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 AC119177.1-201ENSMUST00000227647 1332 ntBASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 AC025913.2-201ENSMUST00000220136 1766 ntBASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav21-dv12A0A075B6C4 Gm9856-201ENSMUST00000217077 2578 ntBASIC11.24□□□□□ -0.61
Trav21-dv12A0A075B6C4 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav21-dv12A0A075B6C4 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC11.24□□□□□ -0.61
Trav21-dv12A0A075B6C4 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
Trav21-dv12A0A075B6C4 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav21-dv12A0A075B6C4 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Trav21-dv12A0A075B6C4 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav21-dv12A0A075B6C4 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav21-dv12A0A075B6C4 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav21-dv12A0A075B6C4 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav21-dv12A0A075B6C4 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav21-dv12A0A075B6C4 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav21-dv12A0A075B6C4 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav21-dv12A0A075B6C4 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav21-dv12A0A075B6C4 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav21-dv12A0A075B6C4 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav21-dv12A0A075B6C4 Gm42670-201ENSMUST00000201816 1292 ntBASIC11.24□□□□□ -0.61
Trav21-dv12A0A075B6C4 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav21-dv12A0A075B6C4 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav21-dv12A0A075B6C4 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav21-dv12A0A075B6C4 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav21-dv12A0A075B6C4 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav21-dv12A0A075B6C4 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav21-dv12A0A075B6C4 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav21-dv12A0A075B6C4 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav21-dv12A0A075B6C4 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav21-dv12A0A075B6C4 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav21-dv12A0A075B6C4 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav21-dv12A0A075B6C4 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trav21-dv12A0A075B6C4 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav21-dv12A0A075B6C4 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav21-dv12A0A075B6C4 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav21-dv12A0A075B6C4 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav21-dv12A0A075B6C4 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trav21-dv12A0A075B6C4 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav21-dv12A0A075B6C4 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav21-dv12A0A075B6C4 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trav21-dv12A0A075B6C4 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Trav21-dv12A0A075B6C4 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Trav21-dv12A0A075B6C4 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav21-dv12A0A075B6C4 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav21-dv12A0A075B6C4 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Trav21-dv12A0A075B6C4 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trav21-dv12A0A075B6C4 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms