Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-1A0A075B699 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-1A0A075B699 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-1A0A075B699 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-1A0A075B699 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-1A0A075B699 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-1A0A075B699 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-1A0A075B699 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav9d-1A0A075B699 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav9d-1A0A075B699 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trav9d-1A0A075B699 Gm4899-201ENSMUST00000178708 719 ntBASIC11.29□□□□□ -0.6
Trav9d-1A0A075B699 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC11.29□□□□□ -0.6
Trav9d-1A0A075B699 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC11.29□□□□□ -0.6
Trav9d-1A0A075B699 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-1A0A075B699 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC11.29□□□□□ -0.6
Trav9d-1A0A075B699 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-1A0A075B699 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Trav9d-1A0A075B699 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-1A0A075B699 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav9d-1A0A075B699 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-1A0A075B699 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-1A0A075B699 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-1A0A075B699 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav9d-1A0A075B699 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-1A0A075B699 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Trav9d-1A0A075B699 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-1A0A075B699 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-1A0A075B699 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trav9d-1A0A075B699 Acot6-202ENSMUST00000222921 3622 ntBASIC11.29□□□□□ -0.6
Trav9d-1A0A075B699 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-1A0A075B699 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-1A0A075B699 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-1A0A075B699 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-1A0A075B699 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-1A0A075B699 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Gm7153-201ENSMUST00000117092 455 ntBASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Gm7862-201ENSMUST00000121461 292 ntBASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Gm17971-201ENSMUST00000190239 806 ntBASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-1A0A075B699 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav9d-1A0A075B699 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav9d-1A0A075B699 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC11.27□□□□□ -0.6
Trav9d-1A0A075B699 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trav9d-1A0A075B699 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav9d-1A0A075B699 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.27□□□□□ -0.6
Trav9d-1A0A075B699 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC11.27□□□□□ -0.6
Trav9d-1A0A075B699 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav9d-1A0A075B699 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav9d-1A0A075B699 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trav9d-1A0A075B699 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Trav9d-1A0A075B699 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav9d-1A0A075B699 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav9d-1A0A075B699 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9d-1A0A075B699 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms