Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav18A0A075B656 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav18A0A075B656 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav18A0A075B656 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav18A0A075B656 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav18A0A075B656 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Trav18A0A075B656 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav18A0A075B656 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav18A0A075B656 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav18A0A075B656 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Trav18A0A075B656 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav18A0A075B656 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav18A0A075B656 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav18A0A075B656 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav18A0A075B656 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav18A0A075B656 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav18A0A075B656 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav18A0A075B656 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav18A0A075B656 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav18A0A075B656 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav18A0A075B656 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav18A0A075B656 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav18A0A075B656 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.98□□□□□ -0.49
Trav18A0A075B656 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav18A0A075B656 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav18A0A075B656 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav18A0A075B656 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.98□□□□□ -0.49
Trav18A0A075B656 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav18A0A075B656 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav18A0A075B656 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav18A0A075B656 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav18A0A075B656 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav18A0A075B656 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav18A0A075B656 Gm5366-201ENSMUST00000215494 1338 ntBASIC11.98□□□□□ -0.49
Trav18A0A075B656 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Trav18A0A075B656 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav18A0A075B656 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav18A0A075B656 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav18A0A075B656 Gm17971-201ENSMUST00000190239 806 ntBASIC11.98□□□□□ -0.49
Trav18A0A075B656 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav18A0A075B656 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav18A0A075B656 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav18A0A075B656 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trav18A0A075B656 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav18A0A075B656 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav18A0A075B656 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav18A0A075B656 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav18A0A075B656 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav18A0A075B656 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav18A0A075B656 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav18A0A075B656 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Trav18A0A075B656 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav18A0A075B656 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Trav18A0A075B656 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav18A0A075B656 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav18A0A075B656 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav18A0A075B656 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav18A0A075B656 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav18A0A075B656 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Trav18A0A075B656 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav18A0A075B656 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav18A0A075B656 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav18A0A075B656 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav18A0A075B656 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav18A0A075B656 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav18A0A075B656 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav18A0A075B656 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav18A0A075B656 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav18A0A075B656 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav18A0A075B656 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav18A0A075B656 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav18A0A075B656 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav18A0A075B656 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav18A0A075B656 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC11.97□□□□□ -0.49
Trav18A0A075B656 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav18A0A075B656 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav18A0A075B656 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC11.97□□□□□ -0.49
Trav18A0A075B656 Gm10060-201ENSMUST00000212002 111 ntBASIC11.97□□□□□ -0.49
Trav18A0A075B656 AC161829.1-201ENSMUST00000220298 281 ntBASIC11.97□□□□□ -0.49
Trav18A0A075B656 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC11.97□□□□□ -0.49
Trav18A0A075B656 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav18A0A075B656 Gm10819-201ENSMUST00000099988 561 ntBASIC11.97□□□□□ -0.49
Trav18A0A075B656 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav18A0A075B656 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav18A0A075B656 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav18A0A075B656 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav18A0A075B656 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav18A0A075B656 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav18A0A075B656 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav18A0A075B656 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav18A0A075B656 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav18A0A075B656 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav18A0A075B656 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav18A0A075B656 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav18A0A075B656 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav18A0A075B656 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav18A0A075B656 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trav18A0A075B656 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav18A0A075B656 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav18A0A075B656 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms