Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav8-1A0A075B641 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trav8-1A0A075B641 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC10.5□□□□□ -0.73
Trav8-1A0A075B641 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav8-1A0A075B641 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav8-1A0A075B641 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav8-1A0A075B641 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav8-1A0A075B641 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav8-1A0A075B641 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav8-1A0A075B641 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav8-1A0A075B641 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav8-1A0A075B641 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav8-1A0A075B641 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav8-1A0A075B641 Gm8242-201ENSMUST00000193029 1420 ntBASIC10.5□□□□□ -0.73
Trav8-1A0A075B641 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav8-1A0A075B641 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav8-1A0A075B641 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav8-1A0A075B641 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav8-1A0A075B641 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav8-1A0A075B641 Gm37861-201ENSMUST00000193534 2869 ntBASIC10.49□□□□□ -0.73
Trav8-1A0A075B641 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Trav8-1A0A075B641 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav8-1A0A075B641 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav8-1A0A075B641 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC10.49□□□□□ -0.73
Trav8-1A0A075B641 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav8-1A0A075B641 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav8-1A0A075B641 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav8-1A0A075B641 Gm26039-201ENSMUST00000158152 144 ntBASIC10.49□□□□□ -0.73
Trav8-1A0A075B641 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav8-1A0A075B641 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav8-1A0A075B641 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC10.49□□□□□ -0.73
Trav8-1A0A075B641 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC10.49□□□□□ -0.73
Trav8-1A0A075B641 Gm30025-201ENSMUST00000218555 728 ntBASIC10.49□□□□□ -0.73
Trav8-1A0A075B641 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav8-1A0A075B641 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav8-1A0A075B641 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav8-1A0A075B641 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav8-1A0A075B641 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav8-1A0A075B641 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Trav8-1A0A075B641 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav8-1A0A075B641 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav8-1A0A075B641 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav8-1A0A075B641 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav8-1A0A075B641 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav8-1A0A075B641 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav8-1A0A075B641 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav8-1A0A075B641 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav8-1A0A075B641 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav8-1A0A075B641 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav8-1A0A075B641 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav8-1A0A075B641 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav8-1A0A075B641 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav8-1A0A075B641 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav8-1A0A075B641 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav8-1A0A075B641 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav8-1A0A075B641 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Trav8-1A0A075B641 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav8-1A0A075B641 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Trav8-1A0A075B641 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav8-1A0A075B641 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav8-1A0A075B641 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav8-1A0A075B641 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav8-1A0A075B641 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav8-1A0A075B641 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav8-1A0A075B641 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav8-1A0A075B641 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Trav8-1A0A075B641 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Trav8-1A0A075B641 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav8-1A0A075B641 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav8-1A0A075B641 Gm5422-201ENSMUST00000050717 2721 ntBASIC10.48□□□□□ -0.73
Trav8-1A0A075B641 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav8-1A0A075B641 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Trav8-1A0A075B641 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC10.48□□□□□ -0.73
Trav8-1A0A075B641 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav8-1A0A075B641 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav8-1A0A075B641 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC10.48□□□□□ -0.73
Trav8-1A0A075B641 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav8-1A0A075B641 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav8-1A0A075B641 Gm6198-201ENSMUST00000191337 2929 ntBASIC10.48□□□□□ -0.73
Trav8-1A0A075B641 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav8-1A0A075B641 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav8-1A0A075B641 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav8-1A0A075B641 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav8-1A0A075B641 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav8-1A0A075B641 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC10.48□□□□□ -0.73
Trav8-1A0A075B641 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav8-1A0A075B641 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav8-1A0A075B641 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC10.48□□□□□ -0.73
Trav8-1A0A075B641 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Gm42471-201ENSMUST00000201457 1865 ntBASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Trav8-1A0A075B641 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms