Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav4n-4A0A075B615 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC10.12□□□□□ -0.79
Trav4n-4A0A075B615 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav4n-4A0A075B615 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav4n-4A0A075B615 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC10.12□□□□□ -0.79
Trav4n-4A0A075B615 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav4n-4A0A075B615 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav4n-4A0A075B615 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav4n-4A0A075B615 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav4n-4A0A075B615 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav4n-4A0A075B615 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav4n-4A0A075B615 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav4n-4A0A075B615 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav4n-4A0A075B615 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav4n-4A0A075B615 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav4n-4A0A075B615 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav4n-4A0A075B615 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Trav4n-4A0A075B615 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav4n-4A0A075B615 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Trav4n-4A0A075B615 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC10.11□□□□□ -0.79
Trav4n-4A0A075B615 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav4n-4A0A075B615 AC121801.1-201ENSMUST00000225363 1899 ntBASIC10.11□□□□□ -0.79
Trav4n-4A0A075B615 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav4n-4A0A075B615 Gm16061-201ENSMUST00000122167 857 ntBASIC10.11□□□□□ -0.79
Trav4n-4A0A075B615 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC10.11□□□□□ -0.79
Trav4n-4A0A075B615 Gm25406-201ENSMUST00000157599 105 ntBASIC10.11□□□□□ -0.79
Trav4n-4A0A075B615 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav4n-4A0A075B615 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
Trav4n-4A0A075B615 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav4n-4A0A075B615 Gm29994-201ENSMUST00000195495 1193 ntBASIC10.11□□□□□ -0.79
Trav4n-4A0A075B615 Gm43353-201ENSMUST00000199224 1295 ntBASIC10.11□□□□□ -0.79
Trav4n-4A0A075B615 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC10.11□□□□□ -0.79
Trav4n-4A0A075B615 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav4n-4A0A075B615 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC10.11□□□□□ -0.79
Trav4n-4A0A075B615 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav4n-4A0A075B615 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav4n-4A0A075B615 Gm4081-201ENSMUST00000195287 1838 ntBASIC10.11□□□□□ -0.79
Trav4n-4A0A075B615 Gm45293-201ENSMUST00000209754 1812 ntBASIC10.11□□□□□ -0.79
Trav4n-4A0A075B615 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav4n-4A0A075B615 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav4n-4A0A075B615 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav4n-4A0A075B615 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav4n-4A0A075B615 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav4n-4A0A075B615 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav4n-4A0A075B615 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC10.11□□□□□ -0.79
Trav4n-4A0A075B615 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav4n-4A0A075B615 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav4n-4A0A075B615 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav4n-4A0A075B615 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav4n-4A0A075B615 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav4n-4A0A075B615 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav4n-4A0A075B615 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav4n-4A0A075B615 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav4n-4A0A075B615 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav4n-4A0A075B615 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav4n-4A0A075B615 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav4n-4A0A075B615 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav4n-4A0A075B615 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav4n-4A0A075B615 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav4n-4A0A075B615 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav4n-4A0A075B615 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav4n-4A0A075B615 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav4n-4A0A075B615 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav4n-4A0A075B615 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav4n-4A0A075B615 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav4n-4A0A075B615 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav4n-4A0A075B615 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav4n-4A0A075B615 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC10.1□□□□□ -0.79
Trav4n-4A0A075B615 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC10.1□□□□□ -0.79
Trav4n-4A0A075B615 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav4n-4A0A075B615 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC10.1□□□□□ -0.79
Trav4n-4A0A075B615 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC10.1□□□□□ -0.79
Trav4n-4A0A075B615 Gm42569-201ENSMUST00000200539 472 ntBASIC10.1□□□□□ -0.79
Trav4n-4A0A075B615 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav4n-4A0A075B615 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav4n-4A0A075B615 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav4n-4A0A075B615 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav4n-4A0A075B615 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC10.1□□□□□ -0.79
Trav4n-4A0A075B615 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav4n-4A0A075B615 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav4n-4A0A075B615 Gm37644-201ENSMUST00000192190 2270 ntBASIC10.1□□□□□ -0.79
Trav4n-4A0A075B615 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav4n-4A0A075B615 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC10.1□□□□□ -0.79
Trav4n-4A0A075B615 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav4n-4A0A075B615 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Trav4n-4A0A075B615 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav4n-4A0A075B615 AC155298.2-201ENSMUST00000225485 6226 ntBASIC10.1□□□□□ -0.79
Trav4n-4A0A075B615 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav4n-4A0A075B615 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav4n-4A0A075B615 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav4n-4A0A075B615 Gm42748-201ENSMUST00000199354 2341 ntBASIC10.1□□□□□ -0.79
Trav4n-4A0A075B615 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav4n-4A0A075B615 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav4n-4A0A075B615 AC139054.1-201ENSMUST00000226898 1598 ntBASIC10.09□□□□□ -0.79
Trav4n-4A0A075B615 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav4n-4A0A075B615 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav4n-4A0A075B615 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav4n-4A0A075B615 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC10.09□□□□□ -0.79
Trav4n-4A0A075B615 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav4n-4A0A075B615 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms