Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cx3cr1Q9Z0D9 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cx3cr1Q9Z0D9 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cx3cr1Q9Z0D9 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.4□□□□□ -0.42
Cx3cr1Q9Z0D9 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cx3cr1Q9Z0D9 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cx3cr1Q9Z0D9 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.4□□□□□ -0.42
Cx3cr1Q9Z0D9 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cx3cr1Q9Z0D9 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cx3cr1Q9Z0D9 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cx3cr1Q9Z0D9 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cx3cr1Q9Z0D9 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cx3cr1Q9Z0D9 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Cx3cr1Q9Z0D9 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cx3cr1Q9Z0D9 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cx3cr1Q9Z0D9 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cx3cr1Q9Z0D9 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cx3cr1Q9Z0D9 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cx3cr1Q9Z0D9 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cx3cr1Q9Z0D9 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cx3cr1Q9Z0D9 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cx3cr1Q9Z0D9 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cx3cr1Q9Z0D9 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cx3cr1Q9Z0D9 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cx3cr1Q9Z0D9 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cx3cr1Q9Z0D9 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cx3cr1Q9Z0D9 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cx3cr1Q9Z0D9 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cx3cr1Q9Z0D9 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cx3cr1Q9Z0D9 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cx3cr1Q9Z0D9 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cx3cr1Q9Z0D9 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cx3cr1Q9Z0D9 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.39□□□□□ -0.43
Cx3cr1Q9Z0D9 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.39□□□□□ -0.43
Cx3cr1Q9Z0D9 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cx3cr1Q9Z0D9 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cx3cr1Q9Z0D9 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.39□□□□□ -0.43
Cx3cr1Q9Z0D9 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.39□□□□□ -0.43
Cx3cr1Q9Z0D9 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.39□□□□□ -0.43
Cx3cr1Q9Z0D9 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.39□□□□□ -0.43
Cx3cr1Q9Z0D9 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cx3cr1Q9Z0D9 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cx3cr1Q9Z0D9 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Cx3cr1Q9Z0D9 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cx3cr1Q9Z0D9 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cx3cr1Q9Z0D9 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cx3cr1Q9Z0D9 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cx3cr1Q9Z0D9 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cx3cr1Q9Z0D9 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cx3cr1Q9Z0D9 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.39□□□□□ -0.43
Cx3cr1Q9Z0D9 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cx3cr1Q9Z0D9 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.39□□□□□ -0.43
Cx3cr1Q9Z0D9 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cx3cr1Q9Z0D9 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Cx3cr1Q9Z0D9 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.38□□□□□ -0.43
Cx3cr1Q9Z0D9 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cx3cr1Q9Z0D9 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.38□□□□□ -0.43
Cx3cr1Q9Z0D9 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cx3cr1Q9Z0D9 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cx3cr1Q9Z0D9 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cx3cr1Q9Z0D9 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cx3cr1Q9Z0D9 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Cx3cr1Q9Z0D9 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.38□□□□□ -0.43
Cx3cr1Q9Z0D9 Gm27646-201ENSMUST00000183989 110 ntBASIC12.38□□□□□ -0.43
Cx3cr1Q9Z0D9 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cx3cr1Q9Z0D9 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cx3cr1Q9Z0D9 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.38□□□□□ -0.43
Cx3cr1Q9Z0D9 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cx3cr1Q9Z0D9 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.38□□□□□ -0.43
Cx3cr1Q9Z0D9 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cx3cr1Q9Z0D9 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Cx3cr1Q9Z0D9 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cx3cr1Q9Z0D9 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Cx3cr1Q9Z0D9 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.38□□□□□ -0.43
Cx3cr1Q9Z0D9 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cx3cr1Q9Z0D9 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.38□□□□□ -0.43
Cx3cr1Q9Z0D9 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.38□□□□□ -0.43
Cx3cr1Q9Z0D9 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cx3cr1Q9Z0D9 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Cx3cr1Q9Z0D9 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cx3cr1Q9Z0D9 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cx3cr1Q9Z0D9 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cx3cr1Q9Z0D9 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cx3cr1Q9Z0D9 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cx3cr1Q9Z0D9 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Cx3cr1Q9Z0D9 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Cx3cr1Q9Z0D9 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cx3cr1Q9Z0D9 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.37□□□□□ -0.43
Cx3cr1Q9Z0D9 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cx3cr1Q9Z0D9 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.37□□□□□ -0.43
Cx3cr1Q9Z0D9 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cx3cr1Q9Z0D9 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cx3cr1Q9Z0D9 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cx3cr1Q9Z0D9 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Cx3cr1Q9Z0D9 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cx3cr1Q9Z0D9 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.37□□□□□ -0.43
Cx3cr1Q9Z0D9 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cx3cr1Q9Z0D9 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cx3cr1Q9Z0D9 Gm18489-201ENSMUST00000172565 551 ntBASIC12.37□□□□□ -0.43
Cx3cr1Q9Z0D9 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms