Protein–RNA interactions for Protein: Q9R1A9

Trex2, Three prime repair exonuclease 2, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex2Q9R1A9 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trex2Q9R1A9 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.35□□□□□ -0.43
Trex2Q9R1A9 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trex2Q9R1A9 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trex2Q9R1A9 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trex2Q9R1A9 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.35□□□□□ -0.43
Trex2Q9R1A9 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.35□□□□□ -0.43
Trex2Q9R1A9 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trex2Q9R1A9 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trex2Q9R1A9 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trex2Q9R1A9 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trex2Q9R1A9 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trex2Q9R1A9 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.35□□□□□ -0.43
Trex2Q9R1A9 Gm44771-201ENSMUST00000206975 626 ntBASIC12.35□□□□□ -0.43
Trex2Q9R1A9 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.35□□□□□ -0.43
Trex2Q9R1A9 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trex2Q9R1A9 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trex2Q9R1A9 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.35□□□□□ -0.43
Trex2Q9R1A9 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trex2Q9R1A9 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trex2Q9R1A9 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trex2Q9R1A9 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trex2Q9R1A9 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trex2Q9R1A9 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trex2Q9R1A9 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trex2Q9R1A9 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trex2Q9R1A9 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trex2Q9R1A9 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.35□□□□□ -0.43
Trex2Q9R1A9 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trex2Q9R1A9 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Trex2Q9R1A9 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.35□□□□□ -0.43
Trex2Q9R1A9 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trex2Q9R1A9 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trex2Q9R1A9 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trex2Q9R1A9 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trex2Q9R1A9 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trex2Q9R1A9 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trex2Q9R1A9 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trex2Q9R1A9 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trex2Q9R1A9 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trex2Q9R1A9 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trex2Q9R1A9 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trex2Q9R1A9 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trex2Q9R1A9 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.34□□□□□ -0.43
Trex2Q9R1A9 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trex2Q9R1A9 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trex2Q9R1A9 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trex2Q9R1A9 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trex2Q9R1A9 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.34□□□□□ -0.43
Trex2Q9R1A9 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trex2Q9R1A9 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trex2Q9R1A9 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trex2Q9R1A9 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trex2Q9R1A9 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trex2Q9R1A9 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trex2Q9R1A9 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trex2Q9R1A9 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trex2Q9R1A9 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trex2Q9R1A9 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trex2Q9R1A9 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trex2Q9R1A9 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trex2Q9R1A9 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trex2Q9R1A9 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trex2Q9R1A9 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.34□□□□□ -0.43
Trex2Q9R1A9 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.34□□□□□ -0.43
Trex2Q9R1A9 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.34□□□□□ -0.43
Trex2Q9R1A9 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trex2Q9R1A9 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trex2Q9R1A9 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trex2Q9R1A9 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trex2Q9R1A9 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trex2Q9R1A9 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trex2Q9R1A9 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.33□□□□□ -0.43
Trex2Q9R1A9 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.33□□□□□ -0.44
Trex2Q9R1A9 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trex2Q9R1A9 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trex2Q9R1A9 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trex2Q9R1A9 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trex2Q9R1A9 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trex2Q9R1A9 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trex2Q9R1A9 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trex2Q9R1A9 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trex2Q9R1A9 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trex2Q9R1A9 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trex2Q9R1A9 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trex2Q9R1A9 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.33□□□□□ -0.44
Trex2Q9R1A9 Gm4899-201ENSMUST00000178708 719 ntBASIC12.33□□□□□ -0.44
Trex2Q9R1A9 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trex2Q9R1A9 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.33□□□□□ -0.44
Trex2Q9R1A9 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.33□□□□□ -0.44
Trex2Q9R1A9 Gm18206-201ENSMUST00000207027 926 ntBASIC12.33□□□□□ -0.44
Trex2Q9R1A9 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trex2Q9R1A9 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trex2Q9R1A9 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trex2Q9R1A9 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trex2Q9R1A9 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trex2Q9R1A9 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trex2Q9R1A9 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.33□□□□□ -0.44
Trex2Q9R1A9 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trex2Q9R1A9 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms