Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Six6Q9QZ28 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Six6Q9QZ28 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.41□□□□□ -0.42
Six6Q9QZ28 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.41□□□□□ -0.42
Six6Q9QZ28 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC12.41□□□□□ -0.42
Six6Q9QZ28 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Six6Q9QZ28 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Six6Q9QZ28 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Six6Q9QZ28 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Six6Q9QZ28 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.41□□□□□ -0.42
Six6Q9QZ28 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Six6Q9QZ28 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Six6Q9QZ28 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Six6Q9QZ28 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Six6Q9QZ28 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Six6Q9QZ28 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Six6Q9QZ28 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Six6Q9QZ28 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.41□□□□□ -0.42
Six6Q9QZ28 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six6Q9QZ28 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Six6Q9QZ28 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.4□□□□□ -0.42
Six6Q9QZ28 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six6Q9QZ28 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Six6Q9QZ28 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six6Q9QZ28 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six6Q9QZ28 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Six6Q9QZ28 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Six6Q9QZ28 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six6Q9QZ28 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six6Q9QZ28 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Six6Q9QZ28 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Six6Q9QZ28 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Six6Q9QZ28 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six6Q9QZ28 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six6Q9QZ28 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six6Q9QZ28 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC12.4□□□□□ -0.42
Six6Q9QZ28 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Six6Q9QZ28 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Six6Q9QZ28 Gm25406-201ENSMUST00000157599 105 ntBASIC12.4□□□□□ -0.42
Six6Q9QZ28 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six6Q9QZ28 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Six6Q9QZ28 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.4□□□□□ -0.42
Six6Q9QZ28 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Six6Q9QZ28 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six6Q9QZ28 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six6Q9QZ28 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Six6Q9QZ28 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six6Q9QZ28 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.4□□□□□ -0.42
Six6Q9QZ28 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six6Q9QZ28 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Six6Q9QZ28 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Six6Q9QZ28 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six6Q9QZ28 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six6Q9QZ28 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six6Q9QZ28 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six6Q9QZ28 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six6Q9QZ28 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Six6Q9QZ28 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six6Q9QZ28 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six6Q9QZ28 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six6Q9QZ28 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Six6Q9QZ28 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.4□□□□□ -0.43
Six6Q9QZ28 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Six6Q9QZ28 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Six6Q9QZ28 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Six6Q9QZ28 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six6Q9QZ28 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC12.39□□□□□ -0.43
Six6Q9QZ28 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
Six6Q9QZ28 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.39□□□□□ -0.43
Six6Q9QZ28 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Six6Q9QZ28 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six6Q9QZ28 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six6Q9QZ28 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six6Q9QZ28 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six6Q9QZ28 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six6Q9QZ28 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six6Q9QZ28 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.39□□□□□ -0.43
Six6Q9QZ28 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six6Q9QZ28 Gm18101-201ENSMUST00000215769 548 ntBASIC12.39□□□□□ -0.43
Six6Q9QZ28 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.39□□□□□ -0.43
Six6Q9QZ28 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.39□□□□□ -0.43
Six6Q9QZ28 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six6Q9QZ28 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six6Q9QZ28 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six6Q9QZ28 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Six6Q9QZ28 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Six6Q9QZ28 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Six6Q9QZ28 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six6Q9QZ28 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Six6Q9QZ28 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six6Q9QZ28 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Six6Q9QZ28 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six6Q9QZ28 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Six6Q9QZ28 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Six6Q9QZ28 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six6Q9QZ28 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six6Q9QZ28 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six6Q9QZ28 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Six6Q9QZ28 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Six6Q9QZ28 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms