Protein–RNA interactions for Protein: Q9JM99

Prg4, Proteoglycan 4, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prg4Q9JM99 Gm8410-201ENSMUST00000117225 605 ntBASIC13.3□□□□□ -0.28
Prg4Q9JM99 Gm13453-201ENSMUST00000118708 357 ntBASIC13.3□□□□□ -0.28
Prg4Q9JM99 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Prg4Q9JM99 Gm27618-201ENSMUST00000183671 60 ntBASIC13.3□□□□□ -0.28
Prg4Q9JM99 Mir7023-201ENSMUST00000185093 64 ntBASIC13.3□□□□□ -0.28
Prg4Q9JM99 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Prg4Q9JM99 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Prg4Q9JM99 Gm45453-201ENSMUST00000211758 853 ntBASIC13.3□□□□□ -0.28
Prg4Q9JM99 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.3□□□□□ -0.28
Prg4Q9JM99 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.3□□□□□ -0.28
Prg4Q9JM99 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.3□□□□□ -0.28
Prg4Q9JM99 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Prg4Q9JM99 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prg4Q9JM99 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prg4Q9JM99 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prg4Q9JM99 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.3□□□□□ -0.28
Prg4Q9JM99 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prg4Q9JM99 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prg4Q9JM99 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Prg4Q9JM99 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prg4Q9JM99 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prg4Q9JM99 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prg4Q9JM99 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prg4Q9JM99 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prg4Q9JM99 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prg4Q9JM99 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Prg4Q9JM99 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prg4Q9JM99 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Prg4Q9JM99 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Prg4Q9JM99 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prg4Q9JM99 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prg4Q9JM99 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.29□□□□□ -0.28
Prg4Q9JM99 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.29□□□□□ -0.28
Prg4Q9JM99 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prg4Q9JM99 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prg4Q9JM99 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Prg4Q9JM99 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prg4Q9JM99 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prg4Q9JM99 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prg4Q9JM99 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prg4Q9JM99 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Prg4Q9JM99 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Prg4Q9JM99 Gm24543-201ENSMUST00000103867 82 ntBASIC13.29□□□□□ -0.28
Prg4Q9JM99 Gm14767-201ENSMUST00000121559 586 ntBASIC13.29□□□□□ -0.28
Prg4Q9JM99 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Prg4Q9JM99 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prg4Q9JM99 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.29□□□□□ -0.28
Prg4Q9JM99 Auts2-212ENSMUST00000178555 309 ntBASIC13.29□□□□□ -0.28
Prg4Q9JM99 Gm27533-201ENSMUST00000183800 152 ntBASIC13.29□□□□□ -0.28
Prg4Q9JM99 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.29□□□□□ -0.28
Prg4Q9JM99 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Prg4Q9JM99 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Prg4Q9JM99 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prg4Q9JM99 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Prg4Q9JM99 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prg4Q9JM99 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prg4Q9JM99 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.29□□□□□ -0.28
Prg4Q9JM99 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Prg4Q9JM99 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prg4Q9JM99 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prg4Q9JM99 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Prg4Q9JM99 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Prg4Q9JM99 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prg4Q9JM99 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prg4Q9JM99 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prg4Q9JM99 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Prg4Q9JM99 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prg4Q9JM99 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.28□□□□□ -0.28
Prg4Q9JM99 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prg4Q9JM99 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prg4Q9JM99 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prg4Q9JM99 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prg4Q9JM99 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Prg4Q9JM99 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.28□□□□□ -0.28
Prg4Q9JM99 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.28□□□□□ -0.28
Prg4Q9JM99 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prg4Q9JM99 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prg4Q9JM99 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Prg4Q9JM99 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prg4Q9JM99 Gm27306-201ENSMUST00000183970 107 ntBASIC13.28□□□□□ -0.28
Prg4Q9JM99 Gm27631-201ENSMUST00000184163 466 ntBASIC13.28□□□□□ -0.28
Prg4Q9JM99 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.28□□□□□ -0.28
Prg4Q9JM99 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prg4Q9JM99 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Prg4Q9JM99 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Prg4Q9JM99 Gm16476-201ENSMUST00000221544 139 ntBASIC13.28□□□□□ -0.28
Prg4Q9JM99 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prg4Q9JM99 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prg4Q9JM99 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prg4Q9JM99 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Prg4Q9JM99 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prg4Q9JM99 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prg4Q9JM99 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prg4Q9JM99 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.28□□□□□ -0.28
Prg4Q9JM99 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Prg4Q9JM99 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prg4Q9JM99 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prg4Q9JM99 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prg4Q9JM99 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prg4Q9JM99 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms