Protein–RNA interactions for Protein: Q9JKB3

Ybx3, Y-box-binding protein 3, mousemouse

Known RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx3Q9JKB3 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ybx3Q9JKB3 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ybx3Q9JKB3 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ybx3Q9JKB3 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ybx3Q9JKB3 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ybx3Q9JKB3 Gm12749-201ENSMUST00000122138 1159 ntBASIC18.81■□□□□ 0.6
Ybx3Q9JKB3 Gm10156-201ENSMUST00000122364 462 ntBASIC18.81■□□□□ 0.6
Ybx3Q9JKB3 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ybx3Q9JKB3 Gm38223-201ENSMUST00000194484 695 ntBASIC18.81■□□□□ 0.6
Ybx3Q9JKB3 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ybx3Q9JKB3 Gm6334-201ENSMUST00000207083 228 ntBASIC18.81■□□□□ 0.6
Ybx3Q9JKB3 AC166997.1-201ENSMUST00000225122 572 ntBASIC18.81■□□□□ 0.6
Ybx3Q9JKB3 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC18.81■□□□□ 0.6
Ybx3Q9JKB3 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ybx3Q9JKB3 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Ybx3Q9JKB3 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ybx3Q9JKB3 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ybx3Q9JKB3 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ybx3Q9JKB3 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ybx3Q9JKB3 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ybx3Q9JKB3 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ybx3Q9JKB3 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ybx3Q9JKB3 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC18.8■□□□□ 0.6
Ybx3Q9JKB3 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ybx3Q9JKB3 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Ybx3Q9JKB3 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ybx3Q9JKB3 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ybx3Q9JKB3 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC18.8■□□□□ 0.6
Ybx3Q9JKB3 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC18.8■□□□□ 0.6
Ybx3Q9JKB3 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ybx3Q9JKB3 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC18.8■□□□□ 0.6
Ybx3Q9JKB3 Gm7895-201ENSMUST00000187459 1173 ntBASIC18.8■□□□□ 0.6
Ybx3Q9JKB3 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ybx3Q9JKB3 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC18.8■□□□□ 0.6
Ybx3Q9JKB3 Snora73a-201ENSMUST00000082453 205 ntBASIC18.8■□□□□ 0.6
Ybx3Q9JKB3 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ybx3Q9JKB3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.8■□□□□ 0.6
Ybx3Q9JKB3 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.8■□□□□ 0.6
Ybx3Q9JKB3 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ybx3Q9JKB3 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ybx3Q9JKB3 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ybx3Q9JKB3 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ybx3Q9JKB3 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Ybx3Q9JKB3 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ybx3Q9JKB3 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ybx3Q9JKB3 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ybx3Q9JKB3 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ybx3Q9JKB3 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Ybx3Q9JKB3 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ybx3Q9JKB3 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ybx3Q9JKB3 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ybx3Q9JKB3 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ybx3Q9JKB3 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ybx3Q9JKB3 Gm8213-201ENSMUST00000118191 441 ntBASIC18.79■□□□□ 0.6
Ybx3Q9JKB3 Gm12485-201ENSMUST00000119641 291 ntBASIC18.79■□□□□ 0.6
Ybx3Q9JKB3 Gm12997-201ENSMUST00000120207 640 ntBASIC18.79■□□□□ 0.6
Ybx3Q9JKB3 Gm5069-202ENSMUST00000192714 1011 ntBASIC18.79■□□□□ 0.6
Ybx3Q9JKB3 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC18.79■□□□□ 0.6
Ybx3Q9JKB3 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ybx3Q9JKB3 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC18.79■□□□□ 0.6
Ybx3Q9JKB3 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ybx3Q9JKB3 Gm7118-201ENSMUST00000200167 1003 ntBASIC18.79■□□□□ 0.6
Ybx3Q9JKB3 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ybx3Q9JKB3 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ybx3Q9JKB3 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ybx3Q9JKB3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ybx3Q9JKB3 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ybx3Q9JKB3 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ybx3Q9JKB3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ybx3Q9JKB3 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ybx3Q9JKB3 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ybx3Q9JKB3 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ybx3Q9JKB3 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ybx3Q9JKB3 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ybx3Q9JKB3 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ybx3Q9JKB3 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ybx3Q9JKB3 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ybx3Q9JKB3 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ybx3Q9JKB3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ybx3Q9JKB3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.78■□□□□ 0.6
Ybx3Q9JKB3 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC18.78■□□□□ 0.6
Ybx3Q9JKB3 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Ybx3Q9JKB3 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ybx3Q9JKB3 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ybx3Q9JKB3 Gm13385-201ENSMUST00000121089 220 ntBASIC18.78■□□□□ 0.6
Ybx3Q9JKB3 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC18.78■□□□□ 0.6
Ybx3Q9JKB3 Nsd1-205ENSMUST00000224693 852 ntBASIC18.78■□□□□ 0.6
Ybx3Q9JKB3 AC139350.3-201ENSMUST00000226151 420 ntBASIC18.78■□□□□ 0.6
Ybx3Q9JKB3 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ybx3Q9JKB3 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ybx3Q9JKB3 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ybx3Q9JKB3 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ybx3Q9JKB3 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ybx3Q9JKB3 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ybx3Q9JKB3 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ybx3Q9JKB3 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ybx3Q9JKB3 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.78■□□□□ 0.6
Ybx3Q9JKB3 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ybx3Q9JKB3 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC18.77■□□□□ 0.6
Ybx3Q9JKB3 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms