Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ube3bQ9ES34 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ube3bQ9ES34 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Ube3bQ9ES34 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC17.36■□□□□ 0.37
Ube3bQ9ES34 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ube3bQ9ES34 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ube3bQ9ES34 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
Ube3bQ9ES34 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ube3bQ9ES34 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ube3bQ9ES34 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ube3bQ9ES34 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ube3bQ9ES34 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ube3bQ9ES34 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.35■□□□□ 0.37
Ube3bQ9ES34 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ube3bQ9ES34 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Ube3bQ9ES34 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC17.35■□□□□ 0.37
Ube3bQ9ES34 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ube3bQ9ES34 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ube3bQ9ES34 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ube3bQ9ES34 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Ube3bQ9ES34 Dupd1-202ENSMUST00000224735 548 ntBASIC17.35■□□□□ 0.37
Ube3bQ9ES34 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ube3bQ9ES34 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ube3bQ9ES34 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ube3bQ9ES34 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ube3bQ9ES34 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ube3bQ9ES34 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.35■□□□□ 0.37
Ube3bQ9ES34 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.35■□□□□ 0.37
Ube3bQ9ES34 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.35■□□□□ 0.37
Ube3bQ9ES34 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ube3bQ9ES34 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3bQ9ES34 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3bQ9ES34 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3bQ9ES34 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ube3bQ9ES34 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3bQ9ES34 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3bQ9ES34 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3bQ9ES34 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.34■□□□□ 0.37
Ube3bQ9ES34 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC17.34■□□□□ 0.37
Ube3bQ9ES34 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3bQ9ES34 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC17.34■□□□□ 0.37
Ube3bQ9ES34 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC17.34■□□□□ 0.37
Ube3bQ9ES34 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3bQ9ES34 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3bQ9ES34 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3bQ9ES34 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC17.34■□□□□ 0.37
Ube3bQ9ES34 Gm9063-201ENSMUST00000223299 582 ntBASIC17.34■□□□□ 0.37
Ube3bQ9ES34 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3bQ9ES34 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3bQ9ES34 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3bQ9ES34 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Ube3bQ9ES34 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3bQ9ES34 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3bQ9ES34 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3bQ9ES34 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3bQ9ES34 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3bQ9ES34 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ube3bQ9ES34 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3bQ9ES34 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3bQ9ES34 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3bQ9ES34 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3bQ9ES34 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube3bQ9ES34 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Ube3bQ9ES34 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ube3bQ9ES34 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Ube3bQ9ES34 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ube3bQ9ES34 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ube3bQ9ES34 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ube3bQ9ES34 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ube3bQ9ES34 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
Ube3bQ9ES34 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Ube3bQ9ES34 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ube3bQ9ES34 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ube3bQ9ES34 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ube3bQ9ES34 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ube3bQ9ES34 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ube3bQ9ES34 Gm44344-201ENSMUST00000200287 129 ntBASIC17.33■□□□□ 0.36
Ube3bQ9ES34 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ube3bQ9ES34 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ube3bQ9ES34 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ube3bQ9ES34 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ube3bQ9ES34 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ube3bQ9ES34 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ube3bQ9ES34 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ube3bQ9ES34 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ube3bQ9ES34 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ube3bQ9ES34 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ube3bQ9ES34 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ube3bQ9ES34 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ube3bQ9ES34 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ube3bQ9ES34 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ube3bQ9ES34 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ube3bQ9ES34 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ube3bQ9ES34 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ube3bQ9ES34 Gm14451-201ENSMUST00000121581 1542 ntBASIC17.32■□□□□ 0.36
Ube3bQ9ES34 BC001981-202ENSMUST00000191393 1545 ntBASIC17.32■□□□□ 0.36
Ube3bQ9ES34 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.32■□□□□ 0.36
Ube3bQ9ES34 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ube3bQ9ES34 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ube3bQ9ES34 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms