Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.89□□□□□ -0.03
Cldnd1Q9CQX5 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cldnd1Q9CQX5 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cldnd1Q9CQX5 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.89□□□□□ -0.03
Cldnd1Q9CQX5 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.89□□□□□ -0.03
Cldnd1Q9CQX5 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.89□□□□□ -0.03
Cldnd1Q9CQX5 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.89□□□□□ -0.03
Cldnd1Q9CQX5 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cldnd1Q9CQX5 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cldnd1Q9CQX5 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cldnd1Q9CQX5 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cldnd1Q9CQX5 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.89□□□□□ -0.03
Cldnd1Q9CQX5 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cldnd1Q9CQX5 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cldnd1Q9CQX5 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cldnd1Q9CQX5 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Cldnd1Q9CQX5 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cldnd1Q9CQX5 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Cldnd1Q9CQX5 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cldnd1Q9CQX5 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cldnd1Q9CQX5 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Cldnd1Q9CQX5 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cldnd1Q9CQX5 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cldnd1Q9CQX5 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cldnd1Q9CQX5 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cldnd1Q9CQX5 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cldnd1Q9CQX5 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cldnd1Q9CQX5 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cldnd1Q9CQX5 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Cldnd1Q9CQX5 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cldnd1Q9CQX5 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cldnd1Q9CQX5 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cldnd1Q9CQX5 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cldnd1Q9CQX5 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cldnd1Q9CQX5 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cldnd1Q9CQX5 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cldnd1Q9CQX5 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cldnd1Q9CQX5 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cldnd1Q9CQX5 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cldnd1Q9CQX5 Gm13392-201ENSMUST00000117708 150 ntBASIC14.88□□□□□ -0.03
Cldnd1Q9CQX5 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC14.88□□□□□ -0.03
Cldnd1Q9CQX5 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC14.88□□□□□ -0.03
Cldnd1Q9CQX5 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cldnd1Q9CQX5 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cldnd1Q9CQX5 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cldnd1Q9CQX5 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.88□□□□□ -0.03
Cldnd1Q9CQX5 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cldnd1Q9CQX5 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.88□□□□□ -0.03
Cldnd1Q9CQX5 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cldnd1Q9CQX5 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.88□□□□□ -0.03
Cldnd1Q9CQX5 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cldnd1Q9CQX5 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cldnd1Q9CQX5 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cldnd1Q9CQX5 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cldnd1Q9CQX5 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cldnd1Q9CQX5 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.88□□□□□ -0.03
Cldnd1Q9CQX5 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cldnd1Q9CQX5 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cldnd1Q9CQX5 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cldnd1Q9CQX5 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cldnd1Q9CQX5 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Cldnd1Q9CQX5 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cldnd1Q9CQX5 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.88□□□□□ -0.03
Cldnd1Q9CQX5 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.88□□□□□ -0.03
Cldnd1Q9CQX5 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Cldnd1Q9CQX5 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.87□□□□□ -0.03
Cldnd1Q9CQX5 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cldnd1Q9CQX5 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.87□□□□□ -0.03
Cldnd1Q9CQX5 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cldnd1Q9CQX5 App-207ENSMUST00000227737 2827 ntBASIC14.87□□□□□ -0.03
Cldnd1Q9CQX5 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.87□□□□□ -0.03
Cldnd1Q9CQX5 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Cldnd1Q9CQX5 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Cldnd1Q9CQX5 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cldnd1Q9CQX5 Gm13226-201ENSMUST00000117838 404 ntBASIC14.87□□□□□ -0.03
Cldnd1Q9CQX5 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Cldnd1Q9CQX5 Gm8062-201ENSMUST00000139696 444 ntBASIC14.87□□□□□ -0.03
Cldnd1Q9CQX5 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.87□□□□□ -0.03
Cldnd1Q9CQX5 Gm17420-201ENSMUST00000164753 153 ntBASIC14.87□□□□□ -0.03
Cldnd1Q9CQX5 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cldnd1Q9CQX5 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.87□□□□□ -0.03
Cldnd1Q9CQX5 Gm17795-201ENSMUST00000214505 757 ntBASIC14.87□□□□□ -0.03
Cldnd1Q9CQX5 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cldnd1Q9CQX5 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cldnd1Q9CQX5 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cldnd1Q9CQX5 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cldnd1Q9CQX5 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cldnd1Q9CQX5 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cldnd1Q9CQX5 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cldnd1Q9CQX5 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cldnd1Q9CQX5 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cldnd1Q9CQX5 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cldnd1Q9CQX5 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cldnd1Q9CQX5 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cldnd1Q9CQX5 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cldnd1Q9CQX5 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cldnd1Q9CQX5 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cldnd1Q9CQX5 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cldnd1Q9CQX5 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.86□□□□□ -0.03
Cldnd1Q9CQX5 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms