Protein–RNA interactions for Protein: Q9CQJ1

Higd2a, HIG1 domain family member 2A, mousemouse

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Higd2aQ9CQJ1 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 AC154412.1-201ENSMUST00000226540 2786 ntBASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 Gm15483-201ENSMUST00000120338 456 ntBASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 Gm13233-201ENSMUST00000118760 1443 ntBASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 Gm13244-201ENSMUST00000118855 1446 ntBASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Higd2aQ9CQJ1 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 Gm43474-201ENSMUST00000196415 774 ntBASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 AC131187.1-201ENSMUST00000224567 809 ntBASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 Nudt18-203ENSMUST00000228768 1578 ntBASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Higd2aQ9CQJ1 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC10.46□□□□□ -0.73
Higd2aQ9CQJ1 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Higd2aQ9CQJ1 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.73
Higd2aQ9CQJ1 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Higd2aQ9CQJ1 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Higd2aQ9CQJ1 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Higd2aQ9CQJ1 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Higd2aQ9CQJ1 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC10.46□□□□□ -0.73
Higd2aQ9CQJ1 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC10.46□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms