Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.85□□□□□ -0.19
Chmp1b1Q99LU0 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp1b1Q99LU0 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.85□□□□□ -0.19
Chmp1b1Q99LU0 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp1b1Q99LU0 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp1b1Q99LU0 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp1b1Q99LU0 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Chmp1b1Q99LU0 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp1b1Q99LU0 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp1b1Q99LU0 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp1b1Q99LU0 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp1b1Q99LU0 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp1b1Q99LU0 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.85□□□□□ -0.19
Chmp1b1Q99LU0 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp1b1Q99LU0 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Chmp1b1Q99LU0 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp1b1Q99LU0 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.85□□□□□ -0.19
Chmp1b1Q99LU0 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.85□□□□□ -0.19
Chmp1b1Q99LU0 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.85□□□□□ -0.19
Chmp1b1Q99LU0 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.85□□□□□ -0.19
Chmp1b1Q99LU0 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.85□□□□□ -0.19
Chmp1b1Q99LU0 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp1b1Q99LU0 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp1b1Q99LU0 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp1b1Q99LU0 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp1b1Q99LU0 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Chmp1b1Q99LU0 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp1b1Q99LU0 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp1b1Q99LU0 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.85□□□□□ -0.19
Chmp1b1Q99LU0 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
Chmp1b1Q99LU0 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp1b1Q99LU0 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp1b1Q99LU0 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp1b1Q99LU0 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Chmp1b1Q99LU0 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp1b1Q99LU0 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp1b1Q99LU0 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Chmp1b1Q99LU0 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp1b1Q99LU0 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp1b1Q99LU0 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp1b1Q99LU0 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp1b1Q99LU0 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.84□□□□□ -0.19
Chmp1b1Q99LU0 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp1b1Q99LU0 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp1b1Q99LU0 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp1b1Q99LU0 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp1b1Q99LU0 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.84□□□□□ -0.19
Chmp1b1Q99LU0 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Chmp1b1Q99LU0 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.84□□□□□ -0.19
Chmp1b1Q99LU0 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Chmp1b1Q99LU0 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp1b1Q99LU0 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp1b1Q99LU0 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp1b1Q99LU0 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.84□□□□□ -0.19
Chmp1b1Q99LU0 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp1b1Q99LU0 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp1b1Q99LU0 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.84□□□□□ -0.19
Chmp1b1Q99LU0 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp1b1Q99LU0 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp1b1Q99LU0 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp1b1Q99LU0 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp1b1Q99LU0 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.84□□□□□ -0.19
Chmp1b1Q99LU0 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp1b1Q99LU0 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp1b1Q99LU0 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp1b1Q99LU0 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Chmp1b1Q99LU0 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp1b1Q99LU0 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp1b1Q99LU0 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chmp1b1Q99LU0 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Chmp1b1Q99LU0 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Chmp1b1Q99LU0 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Chmp1b1Q99LU0 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp1b1Q99LU0 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp1b1Q99LU0 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.83□□□□□ -0.2
Chmp1b1Q99LU0 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp1b1Q99LU0 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Chmp1b1Q99LU0 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp1b1Q99LU0 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp1b1Q99LU0 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp1b1Q99LU0 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp1b1Q99LU0 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp1b1Q99LU0 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp1b1Q99LU0 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Chmp1b1Q99LU0 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.83□□□□□ -0.2
Chmp1b1Q99LU0 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Chmp1b1Q99LU0 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp1b1Q99LU0 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Chmp1b1Q99LU0 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp1b1Q99LU0 Gm43767-201ENSMUST00000198933 381 ntBASIC13.83□□□□□ -0.2
Chmp1b1Q99LU0 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.83□□□□□ -0.2
Chmp1b1Q99LU0 AW822252-206ENSMUST00000208904 237 ntBASIC13.83□□□□□ -0.2
Chmp1b1Q99LU0 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.83□□□□□ -0.2
Chmp1b1Q99LU0 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp1b1Q99LU0 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp1b1Q99LU0 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp1b1Q99LU0 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp1b1Q99LU0 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp1b1Q99LU0 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp1b1Q99LU0 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms