Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clcc1Q99LI2 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcc1Q99LI2 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcc1Q99LI2 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcc1Q99LI2 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcc1Q99LI2 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcc1Q99LI2 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcc1Q99LI2 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcc1Q99LI2 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcc1Q99LI2 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.47□□□□□ -0.09
Clcc1Q99LI2 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcc1Q99LI2 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcc1Q99LI2 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Clcc1Q99LI2 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcc1Q99LI2 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcc1Q99LI2 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcc1Q99LI2 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcc1Q99LI2 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.47□□□□□ -0.09
Clcc1Q99LI2 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcc1Q99LI2 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcc1Q99LI2 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcc1Q99LI2 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Clcc1Q99LI2 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Clcc1Q99LI2 Gm13223-201ENSMUST00000118609 747 ntBASIC14.47□□□□□ -0.09
Clcc1Q99LI2 Gm13015-201ENSMUST00000118674 204 ntBASIC14.47□□□□□ -0.09
Clcc1Q99LI2 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Clcc1Q99LI2 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.47□□□□□ -0.09
Clcc1Q99LI2 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.47□□□□□ -0.09
Clcc1Q99LI2 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.47□□□□□ -0.09
Clcc1Q99LI2 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.47□□□□□ -0.09
Clcc1Q99LI2 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcc1Q99LI2 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcc1Q99LI2 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcc1Q99LI2 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcc1Q99LI2 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Clcc1Q99LI2 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcc1Q99LI2 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcc1Q99LI2 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Clcc1Q99LI2 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcc1Q99LI2 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcc1Q99LI2 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.47□□□□□ -0.09
Clcc1Q99LI2 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcc1Q99LI2 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcc1Q99LI2 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.47□□□□□ -0.09
Clcc1Q99LI2 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Clcc1Q99LI2 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clcc1Q99LI2 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clcc1Q99LI2 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clcc1Q99LI2 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Clcc1Q99LI2 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clcc1Q99LI2 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.46□□□□□ -0.09
Clcc1Q99LI2 Gm12151-201ENSMUST00000121374 290 ntBASIC14.46□□□□□ -0.09
Clcc1Q99LI2 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.46□□□□□ -0.09
Clcc1Q99LI2 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Clcc1Q99LI2 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.46□□□□□ -0.09
Clcc1Q99LI2 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clcc1Q99LI2 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.46□□□□□ -0.09
Clcc1Q99LI2 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clcc1Q99LI2 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Clcc1Q99LI2 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
Clcc1Q99LI2 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clcc1Q99LI2 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clcc1Q99LI2 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clcc1Q99LI2 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clcc1Q99LI2 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.1
Clcc1Q99LI2 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcc1Q99LI2 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.45□□□□□ -0.1
Clcc1Q99LI2 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcc1Q99LI2 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.45□□□□□ -0.1
Clcc1Q99LI2 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcc1Q99LI2 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcc1Q99LI2 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcc1Q99LI2 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcc1Q99LI2 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Clcc1Q99LI2 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Clcc1Q99LI2 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Clcc1Q99LI2 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clcc1Q99LI2 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcc1Q99LI2 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clcc1Q99LI2 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.45□□□□□ -0.1
Clcc1Q99LI2 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Clcc1Q99LI2 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clcc1Q99LI2 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.45□□□□□ -0.1
Clcc1Q99LI2 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.45□□□□□ -0.1
Clcc1Q99LI2 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcc1Q99LI2 Gm18049-201ENSMUST00000208909 581 ntBASIC14.45□□□□□ -0.1
Clcc1Q99LI2 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.45□□□□□ -0.1
Clcc1Q99LI2 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcc1Q99LI2 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.45□□□□□ -0.1
Clcc1Q99LI2 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcc1Q99LI2 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcc1Q99LI2 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcc1Q99LI2 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcc1Q99LI2 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.45□□□□□ -0.1
Clcc1Q99LI2 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
Clcc1Q99LI2 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcc1Q99LI2 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.44□□□□□ -0.1
Clcc1Q99LI2 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.44□□□□□ -0.1
Clcc1Q99LI2 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcc1Q99LI2 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms