Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdha8Q91Y12 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdha8Q91Y12 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdha8Q91Y12 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.27□□□□□ -0.13
Pcdha8Q91Y12 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdha8Q91Y12 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.27□□□□□ -0.13
Pcdha8Q91Y12 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdha8Q91Y12 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdha8Q91Y12 Gm9727-201ENSMUST00000161387 555 ntBASIC14.27□□□□□ -0.13
Pcdha8Q91Y12 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Pcdha8Q91Y12 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdha8Q91Y12 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Pcdha8Q91Y12 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdha8Q91Y12 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Pcdha8Q91Y12 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdha8Q91Y12 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdha8Q91Y12 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Pcdha8Q91Y12 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdha8Q91Y12 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha8Q91Y12 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdha8Q91Y12 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha8Q91Y12 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha8Q91Y12 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha8Q91Y12 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha8Q91Y12 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha8Q91Y12 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha8Q91Y12 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha8Q91Y12 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.26□□□□□ -0.13
Pcdha8Q91Y12 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.26□□□□□ -0.13
Pcdha8Q91Y12 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Pcdha8Q91Y12 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha8Q91Y12 Gm18206-201ENSMUST00000207027 926 ntBASIC14.26□□□□□ -0.13
Pcdha8Q91Y12 Thap2-203ENSMUST00000218989 527 ntBASIC14.26□□□□□ -0.13
Pcdha8Q91Y12 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Pcdha8Q91Y12 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha8Q91Y12 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha8Q91Y12 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha8Q91Y12 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha8Q91Y12 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pcdha8Q91Y12 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pcdha8Q91Y12 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha8Q91Y12 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha8Q91Y12 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.26□□□□□ -0.13
Pcdha8Q91Y12 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pcdha8Q91Y12 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Pcdha8Q91Y12 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Pcdha8Q91Y12 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha8Q91Y12 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha8Q91Y12 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha8Q91Y12 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha8Q91Y12 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha8Q91Y12 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha8Q91Y12 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha8Q91Y12 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha8Q91Y12 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Pcdha8Q91Y12 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha8Q91Y12 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha8Q91Y12 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha8Q91Y12 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha8Q91Y12 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.25□□□□□ -0.13
Pcdha8Q91Y12 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pcdha8Q91Y12 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.25□□□□□ -0.13
Pcdha8Q91Y12 Gm5177-201ENSMUST00000183092 997 ntBASIC14.25□□□□□ -0.13
Pcdha8Q91Y12 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.25□□□□□ -0.13
Pcdha8Q91Y12 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha8Q91Y12 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha8Q91Y12 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha8Q91Y12 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Pcdha8Q91Y12 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha8Q91Y12 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha8Q91Y12 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha8Q91Y12 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha8Q91Y12 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha8Q91Y12 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha8Q91Y12 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.25□□□□□ -0.13
Pcdha8Q91Y12 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.25□□□□□ -0.13
Pcdha8Q91Y12 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pcdha8Q91Y12 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pcdha8Q91Y12 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha8Q91Y12 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha8Q91Y12 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha8Q91Y12 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha8Q91Y12 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha8Q91Y12 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Pcdha8Q91Y12 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha8Q91Y12 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Pcdha8Q91Y12 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha8Q91Y12 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha8Q91Y12 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha8Q91Y12 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha8Q91Y12 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha8Q91Y12 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
Pcdha8Q91Y12 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pcdha8Q91Y12 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha8Q91Y12 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.24□□□□□ -0.13
Pcdha8Q91Y12 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha8Q91Y12 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha8Q91Y12 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.24□□□□□ -0.13
Pcdha8Q91Y12 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Pcdha8Q91Y12 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms