Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhga4Q91XY4 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhga4Q91XY4 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhga4Q91XY4 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.43□□□□□ -0.1
Pcdhga4Q91XY4 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Pcdhga4Q91XY4 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhga4Q91XY4 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhga4Q91XY4 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhga4Q91XY4 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhga4Q91XY4 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhga4Q91XY4 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.43□□□□□ -0.1
Pcdhga4Q91XY4 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhga4Q91XY4 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.43□□□□□ -0.1
Pcdhga4Q91XY4 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.43□□□□□ -0.1
Pcdhga4Q91XY4 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.43□□□□□ -0.1
Pcdhga4Q91XY4 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhga4Q91XY4 Gm27494-201ENSMUST00000184735 189 ntBASIC14.43□□□□□ -0.1
Pcdhga4Q91XY4 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.43□□□□□ -0.1
Pcdhga4Q91XY4 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.43□□□□□ -0.1
Pcdhga4Q91XY4 Gm17968-201ENSMUST00000194902 784 ntBASIC14.43□□□□□ -0.1
Pcdhga4Q91XY4 Gm43575-201ENSMUST00000196420 516 ntBASIC14.43□□□□□ -0.1
Pcdhga4Q91XY4 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.43□□□□□ -0.1
Pcdhga4Q91XY4 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.43□□□□□ -0.1
Pcdhga4Q91XY4 Gm45612-201ENSMUST00000211320 160 ntBASIC14.43□□□□□ -0.1
Pcdhga4Q91XY4 Gm45747-201ENSMUST00000212203 999 ntBASIC14.43□□□□□ -0.1
Pcdhga4Q91XY4 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.43□□□□□ -0.1
Pcdhga4Q91XY4 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.43□□□□□ -0.1
Pcdhga4Q91XY4 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhga4Q91XY4 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Pcdhga4Q91XY4 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.43□□□□□ -0.1
Pcdhga4Q91XY4 Gm10154-201ENSMUST00000084445 354 ntBASIC14.43□□□□□ -0.1
Pcdhga4Q91XY4 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.43□□□□□ -0.1
Pcdhga4Q91XY4 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhga4Q91XY4 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhga4Q91XY4 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhga4Q91XY4 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhga4Q91XY4 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhga4Q91XY4 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhga4Q91XY4 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhga4Q91XY4 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhga4Q91XY4 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhga4Q91XY4 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.42□□□□□ -0.1
Pcdhga4Q91XY4 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.42□□□□□ -0.1
Pcdhga4Q91XY4 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.42□□□□□ -0.1
Pcdhga4Q91XY4 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Pcdhga4Q91XY4 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhga4Q91XY4 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhga4Q91XY4 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Pcdhga4Q91XY4 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhga4Q91XY4 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Pcdhga4Q91XY4 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhga4Q91XY4 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhga4Q91XY4 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhga4Q91XY4 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.42□□□□□ -0.1
Pcdhga4Q91XY4 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.42□□□□□ -0.1
Pcdhga4Q91XY4 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.42□□□□□ -0.1
Pcdhga4Q91XY4 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhga4Q91XY4 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhga4Q91XY4 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhga4Q91XY4 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhga4Q91XY4 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhga4Q91XY4 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhga4Q91XY4 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhga4Q91XY4 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhga4Q91XY4 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhga4Q91XY4 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.42□□□□□ -0.1
Pcdhga4Q91XY4 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Pcdhga4Q91XY4 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhga4Q91XY4 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.42□□□□□ -0.1
Pcdhga4Q91XY4 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhga4Q91XY4 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhga4Q91XY4 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhga4Q91XY4 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhga4Q91XY4 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Pcdhga4Q91XY4 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga4Q91XY4 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Pcdhga4Q91XY4 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga4Q91XY4 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga4Q91XY4 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga4Q91XY4 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga4Q91XY4 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.41□□□□□ -0.1
Pcdhga4Q91XY4 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga4Q91XY4 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga4Q91XY4 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga4Q91XY4 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.41□□□□□ -0.1
Pcdhga4Q91XY4 Gm26308-201ENSMUST00000157768 69 ntBASIC14.41□□□□□ -0.1
Pcdhga4Q91XY4 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga4Q91XY4 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Pcdhga4Q91XY4 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga4Q91XY4 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Pcdhga4Q91XY4 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga4Q91XY4 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Pcdhga4Q91XY4 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.41□□□□□ -0.1
Pcdhga4Q91XY4 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga4Q91XY4 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhga4Q91XY4 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.41□□□□□ -0.1
Pcdhga4Q91XY4 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga4Q91XY4 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga4Q91XY4 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhga4Q91XY4 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms