Protein–RNA interactions for Protein: Q8R3K3

Ptcd2, Pentatricopeptide repeat-containing protein 2, mitochondrial, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd2Q8R3K3 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ptcd2Q8R3K3 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ptcd2Q8R3K3 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ptcd2Q8R3K3 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ptcd2Q8R3K3 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ptcd2Q8R3K3 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ptcd2Q8R3K3 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ptcd2Q8R3K3 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ptcd2Q8R3K3 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Ptcd2Q8R3K3 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ptcd2Q8R3K3 Gm15460-201ENSMUST00000118147 391 ntBASIC15.37■□□□□ 0.05
Ptcd2Q8R3K3 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC15.37■□□□□ 0.05
Ptcd2Q8R3K3 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC15.37■□□□□ 0.05
Ptcd2Q8R3K3 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ptcd2Q8R3K3 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC15.37■□□□□ 0.05
Ptcd2Q8R3K3 CT573034.1-201ENSMUST00000222983 313 ntBASIC15.37■□□□□ 0.05
Ptcd2Q8R3K3 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ptcd2Q8R3K3 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Ptcd2Q8R3K3 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ptcd2Q8R3K3 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ptcd2Q8R3K3 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ptcd2Q8R3K3 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ptcd2Q8R3K3 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Ptcd2Q8R3K3 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Ptcd2Q8R3K3 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ptcd2Q8R3K3 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ptcd2Q8R3K3 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ptcd2Q8R3K3 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ptcd2Q8R3K3 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.37■□□□□ 0.05
Ptcd2Q8R3K3 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ptcd2Q8R3K3 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC15.36■□□□□ 0.05
Ptcd2Q8R3K3 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ptcd2Q8R3K3 Gm45751-201ENSMUST00000210185 1573 ntBASIC15.36■□□□□ 0.05
Ptcd2Q8R3K3 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ptcd2Q8R3K3 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ptcd2Q8R3K3 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ptcd2Q8R3K3 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.36■□□□□ 0.05
Ptcd2Q8R3K3 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ptcd2Q8R3K3 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ptcd2Q8R3K3 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Ptcd2Q8R3K3 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.36■□□□□ 0.05
Ptcd2Q8R3K3 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Ptcd2Q8R3K3 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ptcd2Q8R3K3 Gm12928-201ENSMUST00000117115 573 ntBASIC15.36■□□□□ 0.05
Ptcd2Q8R3K3 Gm13216-201ENSMUST00000117145 591 ntBASIC15.36■□□□□ 0.05
Ptcd2Q8R3K3 Gm13342-201ENSMUST00000121055 207 ntBASIC15.36■□□□□ 0.05
Ptcd2Q8R3K3 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ptcd2Q8R3K3 Gm19184-201ENSMUST00000196798 928 ntBASIC15.36■□□□□ 0.05
Ptcd2Q8R3K3 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC15.36■□□□□ 0.05
Ptcd2Q8R3K3 Gm6916-202ENSMUST00000205523 195 ntBASIC15.36■□□□□ 0.05
Ptcd2Q8R3K3 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC15.36■□□□□ 0.05
Ptcd2Q8R3K3 AC134335.2-201ENSMUST00000227660 440 ntBASIC15.36■□□□□ 0.05
Ptcd2Q8R3K3 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Ptcd2Q8R3K3 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC15.36■□□□□ 0.05
Ptcd2Q8R3K3 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Ptcd2Q8R3K3 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Ptcd2Q8R3K3 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ptcd2Q8R3K3 AL645783.1-201ENSMUST00000221416 1832 ntBASIC15.36■□□□□ 0.05
Ptcd2Q8R3K3 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ptcd2Q8R3K3 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ptcd2Q8R3K3 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ptcd2Q8R3K3 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Ptcd2Q8R3K3 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ptcd2Q8R3K3 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ptcd2Q8R3K3 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.35■□□□□ 0.05
Ptcd2Q8R3K3 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ptcd2Q8R3K3 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ptcd2Q8R3K3 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Ptcd2Q8R3K3 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ptcd2Q8R3K3 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ptcd2Q8R3K3 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ptcd2Q8R3K3 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Ptcd2Q8R3K3 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC15.35■□□□□ 0.05
Ptcd2Q8R3K3 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC15.35■□□□□ 0.05
Ptcd2Q8R3K3 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ptcd2Q8R3K3 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
Ptcd2Q8R3K3 Gm27341-201ENSMUST00000183570 106 ntBASIC15.35■□□□□ 0.05
Ptcd2Q8R3K3 Gm27501-201ENSMUST00000183599 107 ntBASIC15.35■□□□□ 0.05
Ptcd2Q8R3K3 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC15.35■□□□□ 0.05
Ptcd2Q8R3K3 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.35■□□□□ 0.05
Ptcd2Q8R3K3 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ptcd2Q8R3K3 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC15.35■□□□□ 0.05
Ptcd2Q8R3K3 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ptcd2Q8R3K3 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ptcd2Q8R3K3 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC15.35■□□□□ 0.05
Ptcd2Q8R3K3 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Ptcd2Q8R3K3 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ptcd2Q8R3K3 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Ptcd2Q8R3K3 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ptcd2Q8R3K3 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ptcd2Q8R3K3 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ptcd2Q8R3K3 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.35■□□□□ 0.05
Ptcd2Q8R3K3 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ptcd2Q8R3K3 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ptcd2Q8R3K3 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ptcd2Q8R3K3 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Ptcd2Q8R3K3 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ptcd2Q8R3K3 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ptcd2Q8R3K3 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ptcd2Q8R3K3 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms