Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ubqln1Q8R317 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Ubqln1Q8R317 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.88□□□□□ -0.19
Ubqln1Q8R317 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ubqln1Q8R317 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.88□□□□□ -0.19
Ubqln1Q8R317 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ubqln1Q8R317 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ubqln1Q8R317 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Ubqln1Q8R317 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ubqln1Q8R317 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubqln1Q8R317 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubqln1Q8R317 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubqln1Q8R317 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubqln1Q8R317 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubqln1Q8R317 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubqln1Q8R317 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.87□□□□□ -0.19
Ubqln1Q8R317 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubqln1Q8R317 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubqln1Q8R317 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ubqln1Q8R317 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ubqln1Q8R317 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.87□□□□□ -0.19
Ubqln1Q8R317 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubqln1Q8R317 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubqln1Q8R317 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubqln1Q8R317 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubqln1Q8R317 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Ubqln1Q8R317 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubqln1Q8R317 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubqln1Q8R317 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubqln1Q8R317 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubqln1Q8R317 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubqln1Q8R317 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ubqln1Q8R317 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubqln1Q8R317 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubqln1Q8R317 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubqln1Q8R317 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubqln1Q8R317 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ubqln1Q8R317 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubqln1Q8R317 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.87□□□□□ -0.19
Ubqln1Q8R317 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ubqln1Q8R317 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.87□□□□□ -0.19
Ubqln1Q8R317 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ubqln1Q8R317 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ubqln1Q8R317 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ubqln1Q8R317 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ubqln1Q8R317 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubqln1Q8R317 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubqln1Q8R317 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ubqln1Q8R317 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ubqln1Q8R317 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Ubqln1Q8R317 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.86□□□□□ -0.19
Ubqln1Q8R317 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubqln1Q8R317 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubqln1Q8R317 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubqln1Q8R317 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ubqln1Q8R317 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubqln1Q8R317 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubqln1Q8R317 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ubqln1Q8R317 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ubqln1Q8R317 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubqln1Q8R317 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubqln1Q8R317 Gm8749-201ENSMUST00000117737 331 ntBASIC13.86□□□□□ -0.19
Ubqln1Q8R317 Gm14494-201ENSMUST00000118786 435 ntBASIC13.86□□□□□ -0.19
Ubqln1Q8R317 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubqln1Q8R317 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ubqln1Q8R317 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.86□□□□□ -0.19
Ubqln1Q8R317 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.86□□□□□ -0.19
Ubqln1Q8R317 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ubqln1Q8R317 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubqln1Q8R317 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubqln1Q8R317 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubqln1Q8R317 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubqln1Q8R317 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubqln1Q8R317 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubqln1Q8R317 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubqln1Q8R317 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubqln1Q8R317 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ubqln1Q8R317 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ubqln1Q8R317 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.86□□□□□ -0.19
Ubqln1Q8R317 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ubqln1Q8R317 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ubqln1Q8R317 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ubqln1Q8R317 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ubqln1Q8R317 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
Ubqln1Q8R317 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ubqln1Q8R317 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubqln1Q8R317 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubqln1Q8R317 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubqln1Q8R317 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubqln1Q8R317 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubqln1Q8R317 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubqln1Q8R317 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubqln1Q8R317 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ubqln1Q8R317 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubqln1Q8R317 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubqln1Q8R317 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubqln1Q8R317 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ubqln1Q8R317 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ubqln1Q8R317 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ubqln1Q8R317 Gm15427-201ENSMUST00000117288 531 ntBASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms