Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.67■□□□□ 0.1
Rpp40Q8R1F9 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp40Q8R1F9 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.67■□□□□ 0.1
Rpp40Q8R1F9 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp40Q8R1F9 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp40Q8R1F9 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp40Q8R1F9 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Rpp40Q8R1F9 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp40Q8R1F9 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.67■□□□□ 0.1
Rpp40Q8R1F9 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp40Q8R1F9 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp40Q8R1F9 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp40Q8R1F9 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Rpp40Q8R1F9 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rpp40Q8R1F9 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.66■□□□□ 0.1
Rpp40Q8R1F9 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Rpp40Q8R1F9 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Rpp40Q8R1F9 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.66■□□□□ 0.1
Rpp40Q8R1F9 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rpp40Q8R1F9 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.66■□□□□ 0.1
Rpp40Q8R1F9 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.66■□□□□ 0.1
Rpp40Q8R1F9 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpp40Q8R1F9 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpp40Q8R1F9 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpp40Q8R1F9 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Rpp40Q8R1F9 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpp40Q8R1F9 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rpp40Q8R1F9 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpp40Q8R1F9 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.66■□□□□ 0.1
Rpp40Q8R1F9 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rpp40Q8R1F9 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpp40Q8R1F9 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.66■□□□□ 0.1
Rpp40Q8R1F9 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpp40Q8R1F9 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.66■□□□□ 0.1
Rpp40Q8R1F9 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpp40Q8R1F9 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Rpp40Q8R1F9 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Rpp40Q8R1F9 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Rpp40Q8R1F9 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpp40Q8R1F9 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpp40Q8R1F9 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Rpp40Q8R1F9 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rpp40Q8R1F9 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpp40Q8R1F9 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.65■□□□□ 0.1
Rpp40Q8R1F9 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpp40Q8R1F9 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpp40Q8R1F9 Gm15920-201ENSMUST00000118998 402 ntBASIC15.65■□□□□ 0.1
Rpp40Q8R1F9 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Rpp40Q8R1F9 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC15.65■□□□□ 0.1
Rpp40Q8R1F9 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.65■□□□□ 0.1
Rpp40Q8R1F9 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.65■□□□□ 0.1
Rpp40Q8R1F9 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rpp40Q8R1F9 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpp40Q8R1F9 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpp40Q8R1F9 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Rpp40Q8R1F9 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.65■□□□□ 0.1
Rpp40Q8R1F9 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpp40Q8R1F9 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpp40Q8R1F9 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpp40Q8R1F9 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpp40Q8R1F9 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rpp40Q8R1F9 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpp40Q8R1F9 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.1
Rpp40Q8R1F9 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Rpp40Q8R1F9 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Gm27430-201ENSMUST00000184585 107 ntBASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Gm29310-201ENSMUST00000185468 696 ntBASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Gm21825-201ENSMUST00000185728 696 ntBASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Gm29109-201ENSMUST00000185895 696 ntBASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Gm21896-201ENSMUST00000186520 696 ntBASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Gm21873-201ENSMUST00000186728 696 ntBASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Gm21794-201ENSMUST00000187056 696 ntBASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Gm21880-201ENSMUST00000187275 696 ntBASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Gm21826-201ENSMUST00000187451 696 ntBASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Gm21198-201ENSMUST00000188393 696 ntBASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Gm21749-201ENSMUST00000189343 696 ntBASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Gm21901-201ENSMUST00000189568 696 ntBASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Gm29424-201ENSMUST00000189716 696 ntBASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Gm28599-201ENSMUST00000189838 694 ntBASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Gm21867-201ENSMUST00000189917 696 ntBASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Gm29269-201ENSMUST00000190087 696 ntBASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Gm21722-201ENSMUST00000190153 696 ntBASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Gm28423-201ENSMUST00000190701 696 ntBASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Gm21899-201ENSMUST00000190745 696 ntBASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Gm21910-201ENSMUST00000191163 696 ntBASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Gm21849-201ENSMUST00000191571 696 ntBASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Gm28678-201ENSMUST00000191593 696 ntBASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Gm20910-201ENSMUST00000193268 696 ntBASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Gm21871-201ENSMUST00000194621 696 ntBASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 Gm44333-201ENSMUST00000197168 107 ntBASIC15.64■□□□□ 0.09
Rpp40Q8R1F9 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms