Protein–RNA interactions for Protein: Q8CH72

Trim32, E3 ubiquitin-protein ligase TRIM32, mousemouse

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim32Q8CH72 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim32Q8CH72 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC16.4■□□□□ 0.22
Trim32Q8CH72 Gm21854-201ENSMUST00000179901 471 ntBASIC16.4■□□□□ 0.22
Trim32Q8CH72 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim32Q8CH72 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Trim32Q8CH72 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim32Q8CH72 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC16.4■□□□□ 0.22
Trim32Q8CH72 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim32Q8CH72 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim32Q8CH72 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim32Q8CH72 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Trim32Q8CH72 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim32Q8CH72 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim32Q8CH72 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim32Q8CH72 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.4■□□□□ 0.22
Trim32Q8CH72 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim32Q8CH72 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim32Q8CH72 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trim32Q8CH72 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim32Q8CH72 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trim32Q8CH72 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trim32Q8CH72 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim32Q8CH72 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim32Q8CH72 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trim32Q8CH72 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim32Q8CH72 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim32Q8CH72 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim32Q8CH72 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.39■□□□□ 0.21
Trim32Q8CH72 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim32Q8CH72 Gm13464-201ENSMUST00000119418 935 ntBASIC16.39■□□□□ 0.21
Trim32Q8CH72 Gm13829-201ENSMUST00000119600 138 ntBASIC16.39■□□□□ 0.21
Trim32Q8CH72 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.39■□□□□ 0.21
Trim32Q8CH72 Gm4691-201ENSMUST00000182339 1000 ntBASIC16.39■□□□□ 0.21
Trim32Q8CH72 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.39■□□□□ 0.21
Trim32Q8CH72 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC16.39■□□□□ 0.21
Trim32Q8CH72 Gm2451-201ENSMUST00000199447 999 ntBASIC16.39■□□□□ 0.21
Trim32Q8CH72 Gm10290-201ENSMUST00000200451 999 ntBASIC16.39■□□□□ 0.21
Trim32Q8CH72 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC16.39■□□□□ 0.21
Trim32Q8CH72 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trim32Q8CH72 Gm45453-201ENSMUST00000211758 853 ntBASIC16.39■□□□□ 0.21
Trim32Q8CH72 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC16.39■□□□□ 0.21
Trim32Q8CH72 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim32Q8CH72 Gm9797-201ENSMUST00000052902 613 ntBASIC16.39■□□□□ 0.21
Trim32Q8CH72 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC16.39■□□□□ 0.21
Trim32Q8CH72 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trim32Q8CH72 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim32Q8CH72 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim32Q8CH72 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim32Q8CH72 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trim32Q8CH72 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.39■□□□□ 0.21
Trim32Q8CH72 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trim32Q8CH72 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim32Q8CH72 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim32Q8CH72 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim32Q8CH72 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim32Q8CH72 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim32Q8CH72 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim32Q8CH72 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trim32Q8CH72 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim32Q8CH72 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim32Q8CH72 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim32Q8CH72 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trim32Q8CH72 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim32Q8CH72 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim32Q8CH72 Gm28760-201ENSMUST00000185995 736 ntBASIC16.38■□□□□ 0.21
Trim32Q8CH72 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.38■□□□□ 0.21
Trim32Q8CH72 Ighv5-13-201ENSMUST00000193550 290 ntBASIC16.38■□□□□ 0.21
Trim32Q8CH72 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim32Q8CH72 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim32Q8CH72 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim32Q8CH72 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim32Q8CH72 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim32Q8CH72 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim32Q8CH72 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim32Q8CH72 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Trim32Q8CH72 Gm8131-201ENSMUST00000213783 1570 ntBASIC16.38■□□□□ 0.21
Trim32Q8CH72 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim32Q8CH72 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim32Q8CH72 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim32Q8CH72 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim32Q8CH72 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Trim32Q8CH72 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim32Q8CH72 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Trim32Q8CH72 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim32Q8CH72 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Trim32Q8CH72 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim32Q8CH72 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim32Q8CH72 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim32Q8CH72 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Trim32Q8CH72 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC16.37■□□□□ 0.21
Trim32Q8CH72 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC16.37■□□□□ 0.21
Trim32Q8CH72 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim32Q8CH72 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.37■□□□□ 0.21
Trim32Q8CH72 Gm43630-201ENSMUST00000201550 776 ntBASIC16.37■□□□□ 0.21
Trim32Q8CH72 Gm44136-201ENSMUST00000203819 1106 ntBASIC16.37■□□□□ 0.21
Trim32Q8CH72 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trim32Q8CH72 Gm18624-201ENSMUST00000220966 658 ntBASIC16.37■□□□□ 0.21
Trim32Q8CH72 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
Trim32Q8CH72 AC159006.1-201ENSMUST00000226396 258 ntBASIC16.37■□□□□ 0.21
Trim32Q8CH72 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms